Evidence map›Paper›PMID 23636324›Full record

ArticleNature2013

Structure of the human smoothened receptor bound to an antitumour agent.

Chong Wang, Huixian Wu, Vsevolod Katritch, Gye Won Han, Xi-Ping Huang, Wei Liu, Fai Yiu Siu, Bryan L Roth, Vadim Cherezov, Raymond C Stevens

Open access · greenAbstract read
In one paragraph

Article in Nature, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 218 papers.

0numbers the graph read from it
0cells of the map it votes in
218citing papers in PubMed
32.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

218 citing papers in PubMed, 456 citations in OpenAlex.

  1. An Investigator-Initiated Open-Label Trial of Sonidegib in Advanced Basal Cell Carcinoma Patients Resistant to Vismodegib.Clinical cancer research : an official journal of the American Association for Cancer Research · 2016
    Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Fully activated structure of the sterol-bound Smoothened GPCR-Gi protein complex.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Structural biology of complement receptors.Frontiers in immunology · 2023
    Review
  19. Review
  20. Review

158 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Chong WangDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA.
Huixian Wu
Vsevolod Katritch
Gye Won Han
Xi-Ping Huang
Wei Liu
Fai Yiu Siu
Bryan L Roth
Vadim Cherezov
Raymond C Stevens
Scripps Research Institute · USNational Institute of Mental Health · USUniversity of North Carolina at Chapel Hill · US

Funding

JCSG Center:Innovative Membrane Protein Technology (RMI)P50GM073197 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI STEVENS, RAYMOND C · 2004 to 2013
$26.8M
Project 3U54GM094618 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI STEVENS, RAYMOND C · 2010 to 2014
$17.1M
Screening CoreU19MH082441 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CARON, MARC G., WETSEL, WILLIAM C · 2007 to 2016
$15.2M
Targeting and Trafficking of 5-HT2A Serotonin ReceptorsR01MH061887 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROTH, BRYAN L. · 2000 to 2014
$4.5M
Diterpines as Selective Kappa Opioid Receptor AgonistsR01DA017204 · NIDA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROTH, BRYAN L. · 2003 to 2014
$3.2M
Deorphanizing the PeptidomeR01DA027170 · NIDA · UNIVERSITY OF MARYLAND BALTIMORE · PI LINDBERG, IRIS, ROTH, BRYAN L. · 2009 to 2012
$1.2M
Ligand Interaction of Glucagon Receptor by Structural and Functional AnalysesF32DK088392 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI SIU, FAI YIU · 2010 to 2012
$159k
NIDA NIH HHS R01 DA017204NIDA NIH HHS R01 DA027170NIDA NIH HHS R01 DA27170NIDDK NIH HHS F32 DK088392NIGMS NIH HHS P50 GM073197NIGMS NIH HHS U54 GM094618NIMH NIH HHS R01 MH061887NIMH NIH HHS R01MH61887NIMH NIH HHS U19 MH082441NIMH NIH HHS U19 MH82441
6 · The paper itself

Abstract

The smoothened (SMO) receptor, a key signal transducer in the hedgehog signalling pathway, is responsible for the maintenance of normal embryonic development and is implicated in carcinogenesis. It is classified as a class frizzled (class F) G-protein-coupled receptor (GPCR), although the canonical hedgehog signalling pathway involves the GLI transcription factors and the sequence similarity with class A GPCRs is less than 10%. Here we report the crystal structure of the transmembrane domain of the human SMO receptor bound to the small-molecule antagonist LY2940680 at 2.5 Å resolution. Although the SMO receptor shares the seven-transmembrane helical fold, most of the conserved motifs for class A GPCRs are absent, and the structure reveals an unusually complex arrangement of long extracellular loops stabilized by four disulphide bonds. The ligand binds at the extracellular end of the seven-transmembrane-helix bundle and forms extensive contacts with the loops.

Indexed as

Amino Acid MotifsAmino Acid SequenceAntineoplastic AgentsBinding SitesCrystallography, X-RayDisulfidesFrizzled ReceptorsHumansLigandsModels, MolecularMolecular Sequence DataPhthalazinesProtein Structure, TertiaryReceptors, G-Protein-CoupledSmoothened ReceptorStructural Homology, ProteinAntineoplastic AgentsDisulfidesFrizzled ReceptorsLigandsLY2940680PhthalazinesReceptors, G-Protein-CoupledSmoothened ReceptorSMO protein, human

Identifiers

PMID23636324
PMCPMC3657389
OpenAlexW2036833206

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.