Evidence map›Paper›PMID 23633923›Full record

ArticleNeoplasia (New York, N.Y.)2013

Epigenetic silencing of the proapoptotic gene BIM in anaplastic large cell lymphoma through an MeCP2/SIN3a deacetylating complex.

Rocco Piazza, Vera Magistroni, Angela Mogavero, Federica Andreoni, Chiara Ambrogio, Roberto Chiarle, Luca Mologni, Petra S Bachmann, Richard B Lock, Paola Collini and 2 more

Open access · goldAbstract read
In one paragraph

Article in Neoplasia (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
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  9. Epigenetics of Cutaneous T-Cell Lymphomas.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Rocco PiazzaDepartment of Health Sciences, University of Milano, Bicocca, Monza, Italy. rocco.piazza@unimib.it
Vera Magistroni
Angela Mogavero
Federica Andreoni
Chiara Ambrogio
Roberto Chiarle
Luca Mologni
Petra S Bachmann
Richard B Lock
Paola Collini
Giuseppe Pelosi
Carlo Gambacorti-Passerini
University of Milano-Bicocca · ITUniversity of Turin · ITChildren's Cancer Institute Australia · AUUniversity of Milan · ITUNSW Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BIM is a proapoptotic member of the Bcl-2 family. Here, we investigated the epigenetic status of the BIM locus in NPM/ALK+ anaplastic large cell lymphoma (ALCL) cell lines and in lymph node biopsies from NPM/ALK+ ALCL patients. We show that BIM is epigenetically silenced in cell lines and lymph node specimens and that treatment with the deacetylase inhibitor trichostatin A restores the histone acetylation, strongly upregulates BIM expression, and induces cell death. BIM silencing occurs through recruitment of MeCP2 and the SIN3a/histone deacetylase 1/2 (HDAC1/2) corepressor complex. This event requires BIM CpG methylation/demethylation with 5-azacytidine that leads to detachment of the MeCP2 corepressor complex and reacetylation of the histone tails. Treatment with the ALK inhibitor PF2341066 or with an inducible shRNA targeting NPM/ALK does not restore BIM locus reacetylation; however, enforced expression of NPM/ALK in an NPM/ALK-negative cell line significantly increases the methylation at the BIM locus. This study demonstrates that BIM is epigenetically silenced in NPM/ALK-positive cells through recruitment of the SIN3a/HDAC1/2 corepressor complex and that NPM/ALK is dispensable to maintain BIM epigenetic silencing but is able to act as an inducer of BIM methylation.

Indexed as

Gene Silencing5' Untranslated RegionsAcetylationApoptosis Regulatory ProteinsBcl-2-Like Protein 11Case-Control StudiesCell Line, TumorCell SurvivalChromatinCpG IslandsDNA MethylationEpigenesis, GeneticGene Expression Regulation, NeoplasticHistone Deacetylase InhibitorsHistonesHumans5' Untranslated RegionsApoptosis Regulatory ProteinsBCL2L11 protein, humanBcl-2-Like Protein 11ChromatinHistone Deacetylase InhibitorsHistonesHydroxamic AcidsMECP2 protein, humanMembrane ProteinsMethyl-CpG-Binding Protein 2p80(NPM-ALK) proteinProtein-Tyrosine KinasesProto-Oncogene ProteinsRepressor ProteinsSIN3A transcription factorSin3 Histone Deacetylase and Corepressor Complextrichostatin A

Identifiers

PMID23633923
PMCPMC3638354
OpenAlexW1801993810

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.