Evidence map›Paper›PMID 23632796›Full record

ArticleEuropean journal of human genetics : EJHG2014

Whole-exome sequencing, without prior linkage, identifies a mutation in LAMB3 as a cause of dominant hypoplastic amelogenesis imperfecta.

James A Poulter, Walid El-Sayed, Roger C Shore, Jennifer Kirkham, Chris F Inglehearn, Alan J Mighell

Open access · hybridAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 69 citations in OpenAlex.

  1. Review
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  7. RecessiveJournal of personalized medicine · 2023
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  9. Recessive Mutations inJournal of dental research · 2022
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  10. Rare compound heterozygous variants ofFrontiers in physiology · 2022
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

James A PoulterSection of Ophthalmology and Neuroscience, Leeds Institute of Molecular Medicine, University of Leeds, Leeds, UK.
Walid El-Sayed1] Section of Ophthalmology and Neuroscience, Leeds Institute of Molecular Medicine, University of Leeds, Leeds, UK [2] Department of Oral Biology, Dental School, Suez Canal University, Ismailia, Egypt [3] Department of Oral Medicine, Leeds Dental Institute, University of Leeds, Leeds, UK.
Roger C ShoreDepartment of Oral Biology, Leeds Dental Institute, University of Leeds, Leeds, UK.
Jennifer KirkhamDepartment of Oral Biology, Leeds Dental Institute, University of Leeds, Leeds, UK.
Chris F InglehearnSection of Ophthalmology and Neuroscience, Leeds Institute of Molecular Medicine, University of Leeds, Leeds, UK.
Alan J Mighell1] Section of Ophthalmology and Neuroscience, Leeds Institute of Molecular Medicine, University of Leeds, Leeds, UK [2] Department of Oral Medicine, Leeds Dental Institute, University of Leeds, Leeds, UK.
University of Leeds · GB

Funding

Wellcome TrustWellcome Trust 093113
6 · The paper itself

Abstract

The conventional approach to identifying the defective gene in a family with an inherited disease is to find the disease locus through family studies. However, the rapid development and decreasing cost of next generation sequencing facilitates a more direct approach. Here, we report the identification of a frameshift mutation in LAMB3 as a cause of dominant hypoplastic amelogenesis imperfecta (AI). Whole-exome sequencing of three affected family members and subsequent filtering of shared variants, without prior genetic linkage, sufficed to identify the pathogenic variant. Simultaneous analysis of multiple family members confirms segregation, enhancing the power to filter the genetic variation found and leading to rapid identification of the pathogenic variant. LAMB3 encodes a subunit of Laminin-5, one of a family of basement membrane proteins with essential functions in cell growth, movement and adhesion. Homozygous LAMB3 mutations cause junctional epidermolysis bullosa (JEB) and enamel defects are seen in JEB cases. However, to our knowledge, this is the first report of dominant AI due to a LAMB3 mutation in the absence of JEB.

Indexed as

Frameshift MutationAmelogenesis ImperfectaCell Adhesion MoleculesEpidermolysis Bullosa, JunctionalExomeFemaleGenetic LinkageHigh-Throughput Nucleotide SequencingHumansKalininMalePedigreeCell Adhesion MoleculesKalinin

Identifiers

PMID23632796
PMCPMC3865405
OpenAlexW2010838046

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.