Evidence map›Paper›PMID 23631829›Full record

ArticleThe journal of physical chemistry. B2013

Sensitive Cu2+-Cu2+ distance measurements in a protein-DNA complex by double-quantum coherence ESR.

Sharon Ruthstein, Ming Ji, Preeti Mehta, Linda Jen-Jacobson, Sunil Saxena

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. A newJournal of magnetic resonance (San Diego, Calif. : 1997) · 2023
    Article
  7. Review
  8. Orientation and dynamics of CuPhysical chemistry chemical physics : PCCP · 2020
    Article
  9. Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sharon RuthsteinDepartment of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
Ming Ji
Preeti Mehta
Linda Jen-Jacobson
Sunil Saxena
University of Pittsburgh · US

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
Sequence Specific DNA Protein InteractionsR37GM029207 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JEN-JACOBSON, LINDA · 2001 to 2010
$4.1M
SEQUENCE-SPECIFIC DNA-PROTEIN INTERACTIONSR01GM029207 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JEN-JACOBSON, LINDA · 1985 to 2018
$1.6M
ACTH AND RELATED PEPTIDESR01GM002907 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI GRUMBACH, MELVIN · 1985 to 1988
–
NCATS NIH HHS UL1 TR000005NIGMS NIH HHS 5R37-GM02907NIGMS NIH HHS R01 GM029207NIGMS NIH HHS R37 GM029207
6 · The paper itself

Abstract

Double quantum coherence (DQC) ESR spectroscopy is applied to measure the Cu(2+)-Cu(2+) distance in the EcoRI-DNA complex. A simple method is proposed to reduce the contribution of nuclear hyperfine and quadrupole interactions to such data. The effects of such interactions between the electron spin of Cu(2+) and neighboring nuclei on the DQC data make it difficult to measure the nanometer range interspin distance. The DQC data is in good agreement with results obtained by double electron electron resonance (DEER) spectroscopy. At the same time, the signal-to-noise ratio per shot in DQC is high. Taken together, these results provide impetus for further development of paramagnetic metal ion-based DQC techniques.

Indexed as

CopperDeoxyribonuclease EcoRIDNAElectron Spin Resonance SpectroscopyModels, MolecularProtein ConformationQuantum TheoryCopperDeoxyribonuclease EcoRIDNA

Identifiers

PMID23631829
PMCPMC3685418
OpenAlexW2049496798

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.