Evidence map›Paper›PMID 23630265›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Dynamics of internal pore opening in K(V) channels probed by a fluorescent unnatural amino acid.

Tanja Kalstrup, Rikard Blunck

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 125 citations in OpenAlex.

  1. A Historical Outline of Fluorescence Spectroscopy in Ion Channel Research.Advances in experimental medicine and biology · 2026
    Review
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  4. Voltage clamp fluorometry inBio-protocol · 2025
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  14. Voltage Clamp Fluorometry: Illuminating the Dynamics of Ion Channels.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
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  16. Article
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11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Tanja KalstrupGroupe d'étude des protéines membranaires (GÉPROM) and Department of Physics, Université de Montréal, Montreal, QC, Canada H3C 3J7.
Rikard Blunck
Université de Montréal · CA

Funding

Canadian Institutes of Health Research MOP-102689
6 · The paper itself

Abstract

Atomic-scale models on the gating mechanism of voltage-gated potassium channels (Kv) are based on linear interpolations between static structures of their initial and final state derived from crystallography and molecular dynamics simulations, and, thus, lack dynamic structural information. The lack of information on dynamics and intermediate states makes it difficult to associate the structural with the dynamic functional data obtained with electrophysiology. Although voltage-clamp fluorometry fills this gap, it is limited to sites extracellularly accessible, when the key region for gating is located at the cytosolic side of the channels. Here, we solved this problem by performing voltage-clamp fluorometry with a fluorescent unnatural amino acid. By using an orthogonal tRNA-synthetase pair, the fluorescent unnatural amino acid was incorporated in the Shaker voltage-gated potassium channel at key regions that were previously inaccessible. Thus, we defined which parts act independently and which parts act cooperatively and found pore opening to occur in two sequential transitions.

Indexed as

Amino AcidsAnimalsCrystallography, X-RayDrosophila melanogasterElectrophysiologyFluorescent DyesFluorometryIon Channel GatingMolecular Dynamics SimulationMutationOocytesPatch-Clamp TechniquesPlasmidsProtein Structure, TertiaryRNA, TransferShaker Superfamily of Potassium ChannelsAmino AcidsFluorescent DyesRNA, TransferShaker Superfamily of Potassium ChannelsAnaptwo-color VCF

Identifiers

PMID23630265
PMCPMC3657800
OpenAlexW1979124759

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.