Evidence map›Paper›PMID 23628137›Full record

ArticleVirology2013

Negatively charged residues in the endodomain are critical for specific assembly of spike protein into murine coronavirus.

Qianqian Yao, Paul S Masters, Rong Ye

Abstract read
In one paragraph

Article in Virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Peplomer bulb shape and coronavirus rotational diffusivity.Physics of fluids (Woodbury, N.Y. : 1994) · 2021
    Article
  4. Coronavirus rotational diffusivity.Physics of fluids (Woodbury, N.Y. : 1994) · 2020
    Article
  5. Review
  6. Article
  7. Enhanced Design of PPE Based on Electrostatic Principle to Eliminate Viruses (SARS-CoV-2).Transactions of the Indian National Academy of Engineering : an international journal of engineering and technology · 2020
    Article
  8. Synanthropic rodents as virus reservoirs and transmitters.Revista da Sociedade Brasileira de Medicina Tropical · 2020
    Review
  9. Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Qianqian YaoDepartment of Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Paul S Masters
Rong Ye
Fudan University · CNNew York State Department of Health · US

Funding

Genetic Analysis of Molecular Interactions in Coronavirus ReplicationR01AI064603 · NIAID · WADSWORTH CENTER · PI MASTERS, PAUL SCOTT · 2005 to 2015
$4.7M
NIAID NIH HHS R01 AI064603NIAID NIH HHS R01AI064603
6 · The paper itself

Abstract

Coronavirus spike (S) protein assembles into virions via its carboxy-terminus, which is composed of a transmembrane domain and an endodomain. Here, the carboxy-terminal charge-rich motif in the endodomain was verified to be critical for the specificity of S assembly into mouse hepatitis virus (MHV). Recombinant MHVs exhibited a range of abilities to accommodate the homologous S endodomains from the betacoronaviruses bovine coronavirus and human SARS-associated coronavirus, the alphacoronavirus porcine transmissible gastroenteritis virus (TGEV), and the gammacoronavirus avian infectious bronchitis virus respectively. Interestingly, in TGEV endodomain chimeras the reverting mutations resulted in stronger S incorporation into virions, and a net gain of negatively charged residues in the charge-rich motif accounted for the improvement. Additionally, MHV S assembly could also be rescued by the acidic carboxy-terminal domain of the nucleocapsid protein. These results indicate an important role for negatively charged endodomain residues in the incorporation of MHV S protein into assembled virions.

Indexed as

Virus AssemblyAmino Acid SequenceAnimalsCattleCell LineCoronavirus, BovineHumansMembrane GlycoproteinsMiceMolecular Sequence DataMurine hepatitis virusMutationProtein Structure, TertiarySevere acute respiratory syndrome-related coronavirusSpike Glycoprotein, CoronavirusTransmissible gastroenteritis virusMembrane GlycoproteinsSpike Glycoprotein, Coronavirusspike glycoprotein, SARS-CoVspike protein, mouse hepatitis virusViral Envelope Proteins

Identifiers

PMID23628137
PMCPMC3772176
OpenAlexW2077756323

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.