Evidence map›Paper›PMID 23626742›Full record

ArticlePloS one2013

Prevalence of transmitted HIV drug resistance in Iran between 2010 and 2011.

Fatemeh Jahanbakhsh, Junko Hattori, Masakazu Matsuda, Shiro Ibe, Seyed-Hamid R Monavari, Arash Memarnejadian, Mohammad R Aghasadeghi, Ehsan Mostafavi, Minoo Mohraz, Hossain Jabbari and 4 more

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. HIV drug resistance among naïve HIV-infected patients in Iran.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2019
    Article
  8. Article
  9. Molecular prevalence of parvovirus B19 among HIV1-infected patients in Iran.Medical journal of the Islamic Republic of Iran · 2018
    Article
  10. Article
  11. Article
  12. Article
  13. Overview of HIV molecular epidemiology among people who inject drugs in Europe and Asia.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2016
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. The emergence of drug resistant HIV variants and novel anti-retroviral therapy.Asian Pacific journal of tropical biomedicine · 2013
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Fatemeh JahanbakhshDepartment of Virology, Tehran University of Medical Science, Tehran, Iran.
Junko Hattori
Masakazu Matsuda
Shiro Ibe
Seyed-Hamid R Monavari
Arash Memarnejadian
Mohammad R Aghasadeghi
Ehsan Mostafavi
Minoo Mohraz
Hossain Jabbari
Kianoush Kamali
Hossein Keyvani
Kayhan Azadmanesh
Wataru Sugiura

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveDrug-resistant (DR) HIV emerges during combined antiretroviral treatment (cART), creating concern about widespread transmission of DR-HIV as cART is expanded in resource-limited countries. The aim of this study was to determine the predominant HIV-1 subtypes and prevalence of transmitted DR mutations among antiretroviral-naïve patients in Iran.

designTo monitor transmission of DR HIV, a threshold surveillance based on the world health organization (WHO) guidelines was implemented in Iran.

methodsFor this HIVDR threshold surveillance study, blood samples were collected from 50 antiretroviral-naïve HIV-1-infected patients. Antiretroviral-resistant mutations were determined by sequencing HIV-1 protease, reverse transcriptase and integrase regions. The HIV-1 subtype was determined by sequencing the p17 and C2-V5 regions of the gag and env genes, respectively.

resultsPhylogenetic analyses of the sequenced regions revealed that 45 (95.7%) of 47 samples that were successfully obtained were CRF35_AD. The remaining two cases were subtype B (2.1%) and CRF01_AE (2.1%). Consistent results were obtained also from Env and Gag sequences. Regarding prevalence of transmitted DR viruses, two cases were found to harbor reverse transcriptase-inhibitor-resistant mutations (4.3%). In addition, although not in the WHO list for surveillance of transmitted mutations, 13 minor protease-inhibitor-resistant mutations listed in the International AIDS Society-USA panel of drug resistance mutations were found. No DR mutations were detected in the integrase region.

conclusionsOur study clarified that CRF35_AD is the major subtype among HIV-1-infected patients in Iran. According to the WHO categorization method of HIVDR threshold survey, the prevalence of transmitted drug resistant HIV in Iran was estimated as moderate (5-15%).

Indexed as

Genes, envAdolescentAdultAnti-HIV AgentsDrug Resistance, Viralenv Gene Products, Human Immunodeficiency VirusFemaleHIV-1HIV InfectionsHIV IntegraseHIV ProteaseHIV Reverse TranscriptaseHumansIranMaleMutationAnti-HIV Agentsenv Gene Products, Human Immunodeficiency VirusHIV IntegraseHIV ProteaseHIV Reverse Transcriptasep16 protease, Human immunodeficiency virus 1p17 gag peptide, human immunodeficiency virusPeptide Fragmentsreverse transcriptase, Human immunodeficiency virus 1

Identifiers

PMID23626742
PMCPMC3633940

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.