Evidence map›Paper›PMID 23625463›Full record

ArticleJournal of molecular medicine (Berlin, Germany)2013

Gene expression profiling and association studies implicate the neuregulin signaling pathway in Behçet's disease susceptibility.

Joana M Xavier, Tiago Krug, Fereydoun Davatchi, Farhad Shahram, Benedita V Fonseca, Gorete Jesus, Filipe Barcelos, Joana Vedes, Manuel Salgado, Bahar Sadeghi Abdollahi and 7 more

Abstract read
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In one paragraph

Article in Journal of molecular medicine (Berlin, Germany), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 4 countries.

Joana M XavierInstituto de Medicina Molecular, Faculdade de Medicina da Universidade de Lisboa, Av. Prof. Egas Moniz, Edifício Egas Moniz, 1649-028 Lisboa, Portugal.
Tiago Krug
Fereydoun Davatchi
Farhad Shahram
Benedita V Fonseca
Gorete Jesus
Filipe Barcelos
Joana Vedes
Manuel Salgado
Bahar Sadeghi Abdollahi
Abdolhadi Nadji
Maria Francisca Moraes-Fontes
Niloofar Mojarad Shafiee
Fahmida Ghaderibarmi
José Vaz Patto
Jorge Crespo
Sofia A Oliveira
Tehran University of Medical Sciences · IRInstituto Gulbenkian de Ciência · PTUniversity of Lisbon · PTHospitais da Universidade de Coimbra · PTHospital Curry Cabral · PTInfant · IEInstituto Português de Malacologia · PTInstituto Português de Reumatologia

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Behçet's disease (BD) is a complex disease with genetic and environmental risk factors implicated in its etiology; however, its pathophysiology is poorly understood. To decipher BD's genetic underpinnings, we combined gene expression profiling with pathway analysis and association studies. We compared the gene expression profiles in peripheral blood mononuclear cells (PBMCs) of 15 patients and 14 matched controls using Affymetrix microarrays and found that the neuregulin signaling pathway was over-represented among the differentially expressed genes. The Epiregulin (EREG), Amphiregulin (AREG), and Neuregulin-1 (NRG1) genes of this pathway stand out as they are also among the top differentially expressed genes. Twelve haplotype tagging SNPs at the EREG-AREG locus and 15 SNPs in NRG1 found associated in at least one published BD genome-wide association study were tested for association with BD in a dataset of 976 Iranian patients and 839 controls. We found a novel association with BD for the rs6845297 SNP located downstream of EREG, and replicated three associations at NRG1 (rs4489285, rs383632, and rs1462891). Multifactor dimensionality reduction analysis indicated the existence of epistatic interactions between EREG and NRG1 variants. EREG-AREG and NRG1, which are members of the epidermal growth factor (EGF) family, seem to modulate BD susceptibility through main effects and gene-gene interactions. These association findings support a role for the EGF/ErbB signaling pathway in BD pathogenesis that warrants further investigation and highlight the importance of combining genetic and genomic approaches to dissect the genetic architecture of complex diseases.

Indexed as

AdolescentAdultAmphiregulinBehcet SyndromeEGF Family of ProteinsEpidermal Growth FactorEpiregulinFemaleGene Expression ProfilingGenome-Wide Association StudyGlycoproteinsHumansIntercellular Signaling Peptides and ProteinsLeukocytes, MononuclearMaleMiddle AgedAmphiregulinAREG protein, humanEGF Family of ProteinsEpidermal Growth FactorEpiregulinEREG protein, humanGlycoproteinsIntercellular Signaling Peptides and ProteinsNeuregulin-1NRG1 protein, human

Identifiers

PMID23625463
OpenAlexW1981128658

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.