Evidence map›Paper›PMID 23623387›Full record

ArticleAmerican journal of human genetics2013

Yunis-Varón syndrome is caused by mutations in FIG4, encoding a phosphoinositide phosphatase.

Philippe M Campeau, Guy M Lenk, James T Lu, Yangjin Bae, Lindsay Burrage, Peter Turnpenny, Jorge Román Corona-Rivera, Lucia Morandi, Marina Mora, Heiko Reutter and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 1 synthesis or guideline pooled it, 141 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Autophagy-lysosomal pathway in neurodegeneration.Molecular neurodegeneration advances · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2024
    Review
  16. FIG4-associated disease manifesting as rapidly progressive amyotrophic lateral sclerosis.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2024
    Article
  17. Article
  18. Article
  19. The endolysosomal pathway and ALS/FTD.Trends in neurosciences · 2023
    Review
  20. The signalling lipid PI3,5POpen biology · 2023
    Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 8 countries.

Philippe M CampeauDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Guy M Lenk
James T Lu
Yangjin Bae
Lindsay Burrage
Peter Turnpenny
Jorge Román Corona-Rivera
Lucia Morandi
Marina Mora
Heiko Reutter
Anneke T Vulto-van Silfhout
Laurence Faivre
Eric Haan
Richard A Gibbs
Miriam H Meisler
Brendan H Lee
Baylor College of Medicine · USFondazione IRCCS Istituto Neurologico Carlo Besta · ITUniversity of Michigan · USHoward Hughes Medical Institute · USRadboud University Nijmegen · NLRoyal Devon and Exeter Hospital · GBSouth Australia Pathology · AUUniversidad de Guadalajara · MXUniversité de Bourgogne · FRUniversity of Bonn · DE

Funding

The Human Genome Sequencing CenterU54HG003273 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI GIBBS, RICHARD A · 2004 to 2015
$341.3M
Michigan Institute for Clinical and Health Research (MCHR)UL1TR000433 · NCATS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MASHOUR, GEORGE ALEXANDER · 2012 to 2016
$49.9M
THE SKELETAL DYSPLASIASP01HD022657 · NICHD · CEDARS-SINAI MEDICAL CENTER · PI COHN, DANIEL H · 1987 to 2011
$17.0M
Project 3: Collagen post-translational modification and cross-linking in OIP01HD070394 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI LEE, BRENDAN · 2011 to 2020
$13.4M
INSERTIONAL MUTANTS AND DEVELOPMENT IN TRANSGENIC MICER01GM024872 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MEISLER, MIRIAM H · 1985 to 2024
$10.7M
HIGH THROUGHPUT SEQUENCING OF AUTISM SPECTRUM DISORDER (ASD) ENDOPHENOTYPESF30MH098571 · NIMH · BAYLOR COLLEGE OF MEDICINE · PI LU, JAMES T · 2012 to 2014
$119k
NCATS NIH HHS UL1 TR000433NHGRI NIH HHS U54 HG003273NHGRI NIH HHS U54 HG003273-09NICHD NIH HHS P01 HD022657NICHD NIH HHS P01 HD070394NICHD NIH HHS P01 HD22657NIGMS NIH HHS R01 GM024872NIGMS NIH HHS R01 GM24872NIMH NIH HHS F30 MH098571NIMH NIH HHS F30 MH098571-01Telethon GTB07001
6 · The paper itself

Abstract

Yunis-Varón syndrome (YVS) is an autosomal-recessive disorder with cleidocranial dysplasia, digital anomalies, and severe neurological involvement. Enlarged vacuoles are found in neurons, muscle, and cartilage. By whole-exome sequencing, we identified frameshift and missense mutations of FIG4 in affected individuals from three unrelated families. FIG4 encodes a phosphoinositide phosphatase required for regulation of PI(3,5)P(2) levels, and thus endosomal trafficking and autophagy. In a functional assay, both missense substitutions failed to correct the vacuolar phenotype of Fig4-null mouse fibroblasts. Homozygous Fig4-null mice exhibit features of YVS, including neurodegeneration and enlarged vacuoles in neurons. We demonstrate that Fig4-null mice also have small skeletons with reduced trabecular bone volume and cortical thickness and that cultured osteoblasts accumulate large vacuoles. Our findings demonstrate that homozygosity or compound heterozygosity for null mutations of FIG4 is responsible for YVS, the most severe known human phenotype caused by defective phosphoinositide metabolism. In contrast, in Charcot-Marie-Tooth disease type 4J (also caused by FIG4 mutations), one of the FIG4 alleles is hypomorphic and disease is limited to the peripheral nervous system. This genotype-phenotype correlation demonstrates that absence of FIG4 activity leads to central nervous system dysfunction and extensive skeletal anomalies. Our results describe a role for PI(3,5)P(2) signaling in skeletal development and maintenance.

Indexed as

AnimalsBase SequenceBone DevelopmentCleidocranial DysplasiaEctodermal DysplasiaExomeFibroblastsFlavoproteinsFrameshift MutationGenetic Predisposition to DiseaseGenotypeHumansLimb Deformities, CongenitalMiceMicrognathismMolecular Sequence DataFIG4 protein, humanFlavoproteinsphosphatidylinositol 3,5-diphosphatePhosphatidylinositol PhosphatesPhosphoric Monoester Hydrolases

Identifiers

PMID23623387
PMCPMC3644641
OpenAlexW2083294698

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.