Evidence map›Paper›PMID 23621901›Full record

ArticleClinical genetics2013

Variations in COL15A1 and COL18A1 influence age of onset of primary open angle glaucoma.

J L Wiggs, G R Howell, K Linkroum, W Abdrabou, E Hodges, C E Braine, L R Pasquale, G J Hannon, J L Haines, S W M John

Open access · hybridAbstract read
In one paragraph

Article in Clinical genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.9field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Glaucoma Genes and Mechanisms.Progress in molecular biology and translational science · 2015
    Review
  16. Article
  17. Common and rare genetic risk factors for glaucoma.Cold Spring Harbor perspectives in medicine · 2014
    Review
  18. Article
  19. Developments in Ocular Genetics: 2013 Annual Review.Asia-Pacific journal of ophthalmology (Philadelphia, Pa.)
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

J L WiggsDepartment of Ophthalmology, Harvard Medical School and Massachusetts Eye and Ear Infirmary, Boston, MA, USA.
G R Howell
K Linkroum
W Abdrabou
E Hodges
C E Braine
L R Pasquale
G J Hannon
J L Haines
S W M John
Jackson Laboratory · USMassachusetts Eye and Ear Infirmary · USCold Spring Harbor Laboratory · USHarvard University · USHoward Hughes Medical Institute · USVanderbilt University · US

Funding

P30 Core Grant for Vision ResearchP30EY014104 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI Eric A Pierce · 2002 to 2026
$15.1M
Factors Determining Intraocular Pressure and Glaucoma SusceptibilityR01EY011721 · NEI · JACKSON LABORATORY · PI JOHN, SIMON W · 2002 to 2018
$12.4M
The NEIGHBORHOOD: POAG Heritable Overall Operational DatabaseR01EY022305 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2012 to 2025
$7.9M
FAMILIAL PRIMARY OPEN ANGLE GLAUCOMAR01EY010886 · NEI · TUFTS MEDICAL CENTER · PI WIGGS, JANEY L · 1995 to 2004
$4.7M
Genetic Etiologies of Primary Open Angle GlaucomaR01EY015872 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2005 to 2009
$3.3M
LINKAGE STUDY OF JUVENILE GLAUCOMAR01EY009847 · NEI · TUFTS MEDICAL CENTER · PI WIGGS, JANEY L · 1999 to 2008
$3.0M
Investigating Cell Specific Roles of the Complement Cascade in GlaucomaR01EY021525 · NEI · JACKSON LABORATORY · PI HOWELL, GARETH R · 2012 to 2016
$2.5M
FACTORS DETERMINING INTRAOCULAR PRESSURER29EY011721 · NEI · JACKSON LABORATORY · PI JOHN, SIMON W · 1997 to 2001
$227k
Howard Hughes Medical InstituteNEI NIH HHS EY00947NEI NIH HHS EY010886NEI NIH HHS EY011721NEI NIH HHS EY015872NEI NIH HHS EY021525NEI NIH HHS P30 EY014104NEI NIH HHS R01 EY009847NEI NIH HHS R01 EY010886NEI NIH HHS R01 EY011721NEI NIH HHS R01 EY015872NEI NIH HHS R01 EY021525NEI NIH HHS R01 EY022305NEI NIH HHS R29 EY011721
6 · The paper itself

Abstract

Primary open angle glaucoma (POAG) is a genetically and phenotypically complex disease that is a leading cause of blindness worldwide. Previously we completed a genome-wide scan for early-onset POAG that identified a locus on 9q22 (GLC1J). To identify potential causative variants underlying GLC1J, we used targeted DNA capture followed by high throughput sequencing of individuals from four GLC1J pedigrees, followed by Sanger sequencing to screen candidate variants in additional pedigrees. A mutation likely to cause early-onset glaucoma was not identified, however COL15A1 variants were found in the youngest affected members of 7 of 15 pedigrees with variable disease onset. In addition, the most common COL15A1 variant, R163H, influenced the age of onset in adult POAG cases. RNA in situ hybridization of mouse eyes shows that Col15a1 is expressed in the multiple ocular structures including ciliary body, astrocytes of the optic nerve and cells in the ganglion cell layer. Sanger sequencing of COL18A1, a related multiplexin collagen, identified a rare variant, A1381T, in members of three additional pedigrees with early-onset disease. These results suggest genetic variation in COL15A1 and COL18A1 can modify the age of onset of both early and late onset POAG.

Indexed as

Genetic VariationAdultAgedAge of OnsetAnimalsCollagenCollagen Type XVIIIExonsFemaleGenotypeGlaucoma, Open-AngleHumansMaleMiceMiddle AgedPedigreeCOL15A1 protein, humanCollagenCollagen Type XVIIIcollagenglaucomamodifying genemyocilin

Identifiers

PMID23621901
PMCPMC3771394
OpenAlexW1848693026

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.