Evidence map›Paper›PMID 23621864›Full record

ArticleMolecular cancer2013

Phospholipid Scramblase 1, an interferon-regulated gene located at 3q23, is regulated by SnoN/SkiL in ovarian cancer cells.

Karthik M Kodigepalli, Pavana Anur, Paul Spellman, Peter J Sims, Meera Nanjundan

Open access · goldAbstract read
In one paragraph

Article in Molecular cancer, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

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  12. Protein profiling of mefloquine resistantInternational journal of mass spectrometry · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Karthik M KodigepalliDepartment of Cell Biology, Microbiology, and Molecular Biology, University of South Florida, 4202 East Fowler Avenue, ISA2015, Tampa, FL 33620, USA.
Pavana Anur
Paul Spellman
Peter J Sims
Meera Nanjundan
Oregon Health & Science University · USUniversity of South Florida · USUniversity of Rochester Medical Center · US

Funding

The Role of Aberrant Splicing of EVl1 in Ovarian Cancer PathophysiologyR01CA123219 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MILLS, GORDON B., NANJUNDAN, MEERA · 2008 to 2012
$2.2M
NCI NIH HHS R01 CA 123219
6 · The paper itself

Abstract

backgroundTreatment of advanced stage ovarian cancer continues to be challenging due to acquired drug resistance and lack of early stage biomarkers. Genes identified to be aberrantly expressed at the 3q26.2 locus (i.e. SnoN/SkiL) have been implicated in ovarian cancer pathophysiology. We have previously shown that SnoN expression is increased in advanced stage ovarian cancers and alters cellular response to arsenic trioxide (As2O3).

findingsWe now demonstrate increased DNA copy number levels (TCGA data) of phospholipid scramblase 1 (PLSCR1, located at 3q23) whose transcript expression in ovarian cell lines is highly correlated with SnoN mRNA. Interestingly, SnoN can modulate PLSCR1 mRNA levels in the absence/presence of interferon (IFN-2α). Both IFN-2α and As2O3 treatment can modulate PLSCR1 mRNA levels in ovarian carcinoma cells. However, SnoN siRNA does not lead to altered PLSCR1 protein implicating other events needed to modulate its protein levels. In addition, we report that PLSCR1 can modulate aspects of the As2O3 cellular response.

conclusionsOur findings warrant further investigation into the role of PLSCR1 in ovarian cancer development and chemoresistance.

Indexed as

Gene Expression Regulation, NeoplasticArsenicalsArsenic TrioxideCell DeathCell Line, TumorChromosomes, Human, Pair 3FemaleGene DosageGene Knockdown TechniquesHumansInterferon-alphaIntracellular Signaling Peptides and ProteinsOvarian NeoplasmsOxidesPhospholipid Transfer ProteinsProto-Oncogene ProteinsArsenicalsArsenic TrioxideInterferon-alphaIntracellular Signaling Peptides and ProteinsOxidesPhospholipid Transfer ProteinsPLSCR1 protein, humanProto-Oncogene ProteinsRNA, MessengerSKIL protein, human

Identifiers

PMID23621864
PMCPMC3644492
OpenAlexW2159714394

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.