Evidence map›Paper›PMID 23617681›Full record

SynthesisBMC genetics2013

Effect of interleukin-6 polymorphism on risk of preterm birth within population strata: a meta-analysis.

Wilfred Wu, Erin A S Clark, Gregory J Stoddard, W Scott Watkins, M Sean Esplin, Tracy A Manuck, Jinchuan Xing, Michael W Varner, Lynn B Jorde

Open access · diamondAbstract readMeta-Analysis
In one paragraph

Synthesis in BMC genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Genetic Polymorphism and Preterm Birth.Indian journal of pediatrics · 2018
    Article
  9. Review
  10. Interplay of cytokines in preterm birth.The Indian journal of medical research · 2017
    Review
  11. Article
  12. Effect of Promoter Polymorphisms on Cytokine Concentration in Preterm Breast Milk and Subsequent Infant Outcomes.Journal of human lactation : official journal of International Lactation Consultant Association · 2016
    Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Wilfred WuDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Erin A S Clark
Gregory J Stoddard
W Scott Watkins
M Sean Esplin
Tracy A Manuck
Jinchuan Xing
Michael W Varner
Lynn B Jorde
University of Utah · USRutgers, The State University of New Jersey · US

Funding

UNIVERSITY OF UTAH CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCE-UL1: BPCAUL1RR025764 · NCRR · UNIVERSITY OF UTAH · PI MCCLAIN, DONALD A. · 2008 to 2011
$19.4M
University of Utah Center for Clinical and Translational Science-UL1UL1TR000105 · NCATS · UNIVERSITY OF UTAH · PI MCCLAIN, DONALD A. · 2012 to 2013
$5.1M
High-throughput Mobile Element Genotyping Using Next-generation SequencingR00HG005846 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI XING, JINCHUAN · 2012 to 2014
$736k
Genetic Polymorphisms Associated with Cerebral Palsy and Neurodevelopmental DelayK23HD061910 · NICHD · UNIVERSITY OF UTAH · PI CLARK, ERIN · 2010 to 2012
$411k
NCATS NIH HHS 8UL1TR000105NCRR NIH HHS UL1RR025764NHGRI NIH HHS R00HG005846NICHD NIH HHS K23 HD061910NICHD NIH HHS K23HD061910
6 · The paper itself

Abstract

backgroundBecause of the role of inflammation in preterm birth (PTB), polymorphisms in and near the interleukin-6 gene (IL6) have been association study targets. Several previous studies have assessed the association between PTB and a single nucleotide polymorphism (SNP), rs1800795, located in the IL6 gene promoter region. Their results have been inconsistent and SNP frequencies have varied strikingly among different populations. We therefore conducted a meta-analysis with subgroup analysis by population strata to: (1) reduce the confounding effect of population structure, (2) increase sample size and statistical power, and (3) elucidate the association between rs1800975 and PTB.

resultsWe reviewed all published papers for PTB phenotype and SNP rs1800795 genotype. Maternal genotype and fetal genotype were analyzed separately and the analyses were stratified by population. The PTB phenotype was defined as gestational age (GA) < 37 weeks, but results from earlier GA were selected when available. All studies were compared by genotype (CC versus CG+GG), based on functional studies.For the maternal genotype analysis, 1,165 PTBs and 3,830 term controls were evaluated. Populations were stratified into women of European descent (for whom the most data were available) and women of heterogeneous origin or admixed populations. All ancestry was self-reported. Women of European descent had a summary odds ratio (OR) of 0.68, (95% confidence interval (CI) 0.51 - 0.91), indicating that the CC genotype is protective against PTB. The result for non-European women was not statistically significant (OR 1.01, 95% CI 0.59 - 1.75). For the fetal genotype analysis, four studies were included; there was no significant association with PTB (OR 0.98, 95% CI 0.72 - 1.33). Sensitivity analysis showed that preterm premature rupture of membrane (PPROM) may be a confounding factor contributing to phenotype heterogeneity.

conclusionsIL6 SNP rs1800795 genotype CC is protective against PTB in women of European descent. It is not significant in other heterogeneous or admixed populations, or in fetal genotype analysis.Population structure is an important confounding factor that should be controlled for in studies of PTB.

Indexed as

Polymorphism, Single NucleotideFemaleHumansInterleukin-6Premature BirthPromoter Regions, GeneticWhite PeopleInterleukin-6

Identifiers

PMID23617681
PMCPMC3639799
OpenAlexW1963732318

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.