Evidence map›Paper›PMID 23615908›Full record

ArticleThe Journal of biological chemistry2013

Biosynthesis of GDP-fucose and other sugar nucleotides in the blood stages of Plasmodium falciparum.

Sílvia Sanz, Giulia Bandini, Diego Ospina, Maria Bernabeu, Karina Mariño, Carmen Fernández-Becerra, Luis Izquierdo

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 44 citations in OpenAlex.

  1. Investigation of carbohydrate-based molecules ofFrontiers in veterinary science · 2026
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  5. Compounds targeting GPI biosynthesis orComputational and structural biotechnology journal · 2022
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  6. Pathogens (Basel, Switzerland) · 2021
    Article
  7. Unveiling the Sugary Secrets ofFrontiers in microbiology · 2021
    Review
  8. Article
  9. ProteinParasitology · 2019
    Review
  10. AParasitology · 2019
    Article
  11. CRISPR/Cas9 and glycomics tools forThe Journal of biological chemistry · 2019
    Article
  12. ProteinFrontiers in cellular and infection microbiology · 2019
    Article
  13. Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Sílvia SanzBarcelona Centre for International Health Research, Hospital Clínic-Universitat de Barcelona, CEK, 1a Planta, Rosselló 149-153, 08036, Barcelona, Spain.
Giulia BandiniCollege of Life Sciences, University of Dundee, Division of Biological Chemistry and Drug Discovery, Wellcome Trust Biocentre, Dundee DD15EH, Scotland, United Kingdom.
Diego OspinaBarcelona Centre for International Health Research, Hospital Clínic-Universitat de Barcelona, CEK, 1a Planta, Rosselló 149-153, 08036, Barcelona, Spain.
Maria BernabeuBarcelona Centre for International Health Research, Hospital Clínic-Universitat de Barcelona, CEK, 1a Planta, Rosselló 149-153, 08036, Barcelona, Spain.
Karina MariñoCollege of Life Sciences, University of Dundee, Division of Biological Chemistry and Drug Discovery, Wellcome Trust Biocentre, Dundee DD15EH, Scotland, United Kingdom.
Carmen Fernández-BecerraBarcelona Centre for International Health Research, Hospital Clínic-Universitat de Barcelona, CEK, 1a Planta, Rosselló 149-153, 08036, Barcelona, Spain.
Luis IzquierdoBarcelona Centre for International Health Research, Hospital Clínic-Universitat de Barcelona, CEK, 1a Planta, Rosselló 149-153, 08036, Barcelona, Spain. Electronic address: luis.izquierdo@cresib.cat.
Universitat de Barcelona · ESUniversity of Dundee · GB

Funding

Function and Mechanism of O-Fucosylation of Malaria ParasiteTSR Domain ProteinsR21AI115063 · NIAID · UNIVERSITY OF FLORIDA · PI DINGLASAN, RHOEL DAVID RAMOS, IZQUIERDO, LUIS · 2015 to 2016
$384k
NIAID NIH HHS R21 AI115063
6 · The paper itself

Abstract

Carbohydrate structures play important roles in many biological processes, including cell adhesion, cell-cell communication, and host-pathogen interactions. Sugar nucleotides are activated forms of sugars used by the cell as donors for most glycosylation reactions. Using a liquid chromatography-tandem mass spectrometry-based method, we identified and quantified the pools of UDP-glucose, UDP-galactose, UDP-N-acetylglucosamine, GDP-mannose, and GDP-fucose in Plasmodium falciparum intraerythrocytic life stages. We assembled these data with the in silico functional reconstruction of the parasite metabolic pathways obtained from the P. falciparum annotated genome, exposing new active biosynthetic routes crucial for further glycosylation reactions. Fucose is a sugar present in glycoconjugates often associated with recognition and adhesion events. Thus, the GDP-fucose precursor is essential in a wide variety of organisms. P. falciparum presents homologues of GDP-mannose 4,6-dehydratase and GDP-L-fucose synthase enzymes that are active in vitro, indicating that most GDP-fucose is formed by a de novo pathway that involves the bioconversion of GDP-mannose. Homologues for enzymes involved in a fucose salvage pathway are apparently absent in the P. falciparum genome. This is in agreement with in vivo metabolic labeling experiments showing that fucose is not significantly incorporated by the parasite. Fluorescence microscopy of epitope-tagged versions of P. falciparum GDP-mannose 4,6-dehydratase and GDP-L-fucose synthase expressed in transgenic 3D7 parasites shows that these enzymes localize in the cytoplasm of P. falciparum during the intraerythrocytic developmental cycle. Although the function of fucose in the parasite is not known, the presence of GDP-fucose suggests that the metabolite may be used for further fucosylation reactions.

Indexed as

Carbohydrate EpimerasesGenomeGuanosine Diphosphate FucoseGuanosine Diphosphate MannoseHumansHydro-LyasesPlasmodium falciparumProtozoan ProteinsCarbohydrate EpimerasesGDPmannose 4,6-dehydrataseGuanosine Diphosphate FucoseGuanosine Diphosphate MannoseHydro-LyasesProtozoan ProteinsFSFucoseGlycobiologyGMDMalariaMetabolismParasite MetabolismPlasmodiumSugar Nucleotides

Identifiers

PMID23615908
PMCPMC3675586
OpenAlexW1987453771

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.