Evidence map›Paper›PMID 23615463›Full record

ArticleAutophagy2013

Reciprocal effects of rab7 deletion in activated and neglected T cells.

Saurabh Ghosh Roy, Michael W Stevens, Lomon So, Aimee L Edinger

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 38 citations in OpenAlex.

  1. Late Endosome Transport by RILP-RAB7A Promotes Dendrite Arborization Independently of Degradation.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Article
  2. Article
  3. Late endosome transport by RILP-RAB7A promotes dendrite arborization.bioRxiv : the preprint server for biology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Saurabh Ghosh RoyDepartment of Developmental and Cell Biology; University of California, Irvine; Irvine, CA USA.
Michael W Stevens
Lomon So
Aimee L Edinger
University of California, Irvine · US

Funding

Effects of sphingolipids on nutrient transporter expression and bioenergeticsR01GM089919 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI EDINGER, AIMEE L · 2010 to 2014
$1.5M
Regulation of nutrient access by growth factors and mTORK08CA100526 · NCI · UNIVERSITY OF PENNSYLVANIA · PI EDINGER, AIMEE L · 2003 to 2007
$689k
NCI NIH HHS K08 CA100526NIGMS NIH HHS R01 GM089919
6 · The paper itself

Abstract

Mouse models lacking proteins essential for autophagosome formation have demonstrated that autophagy plays a critical role in T cell development and activation. To better understand the function of autophagy in quiescent and activated lymphocytes, we have generated a mouse deficient in rab7 selectively in T cells and compared the effects of blocking autophagy at an early (atg5(-/-)) or late (rab7(-/-)) stage on T cell biology. rab7(-/-) murine embryonic fibroblasts (MEFs) and T cells generated from these mice exhibit a profound block in autophagosome degradation and are as sensitive as atg5(-/-) cells to extracellular nutrient limitation. Rab7(flox/flox)CD4-Cre(+) mice lacking the RAB7 protein in both CD4 and CD8 T cells had reduced numbers of peripheral T cells, but this defect was not as severe as in Atg5(flox/flox)CD4-Cre(+) mice despite efficient rab7 deletion and inhibition of autophagic flux. This difference may stem from the reduced ROS generation and enhanced survival of rab7(-/-) T cells compared with wild-type and atg5(-/-) T cells in the absence of cytokine stimulation. rab7(-/-) and atg5(-/-) T cells exhibited similar defects in proliferation both following antibody-mediated T cell receptor (TCR) cross-linking and using a more physiologic activation protocol, allogeneic stimulation. Interestingly, autophagy was not required to provide building blocks for the upregulation of nutrient transporter proteins immediately following activation. Together, these studies suggest that autophagosome degradation is required for the survival of activated T cells, but that loss of rab7 is better tolerated in naïve T cells than the loss of atg5.

Indexed as

Gene DeletionAllelesAnimalsAutophagyAutophagy-Related Protein 5BiomarkersEmbryo, MammalianFibroblastsLymphocyte ActivationMiceMice, KnockoutMicrotubule-Associated ProteinsMitochondriaPhagosomesPhenotyperab7 GTP-Binding ProteinsAtg5 protein, mouseAutophagy-Related Protein 5BiomarkersMicrotubule-Associated Proteinsrab7 GTP-Binding Proteinsrab7 GTP-binding proteins, mouserab GTP-Binding ProteinsReactive Oxygen SpeciesATG5autophagygrowth factor withdrawallysosomal fusionRAB7T cells

Identifiers

PMID23615463
PMCPMC3722312
OpenAlexW1996614295

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.