Evidence map›Paper›PMID 23613933›Full record

ArticlePloS one2013

X-chromosomal maternal and fetal SNPs and the risk of spontaneous preterm delivery in a Danish/Norwegian genome-wide association study.

Solveig Myking, Heather A Boyd, Ronny Myhre, Bjarke Feenstra, Astanand Jugessur, Aase S Devold Pay, Ingrid H G Ostensen, Nils-Halvdan Morken, Tamara Busch, Kelli K Ryckman and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. The Role of Genetics in Preterm Birth.Reproductive sciences (Thousand Oaks, Calif.) · 2023
    Review
  5. Genetics, epigenetics, and transcriptomics of preterm birth.American journal of reproductive immunology (New York, N.Y. : 1989) · 2022
    Review
  6. Systematic review of preterm birth multi-omic biomarker studies.Expert reviews in molecular medicine · 2022
    Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. Translational Systems Pharmacology Studies in Pregnant Women.CPT: pharmacometrics & systems pharmacology · 2018
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Instability in X chromosome inactivation patterns in AMD: a new risk factor?Medical hypothesis, discovery & innovation ophthalmology journal · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 5 countries.

Solveig MykingDepartment of Genes and Environment, Division of Epidemiology, Norwegian Institute of Public Health, Oslo, Norway.
Heather A Boyd
Ronny Myhre
Bjarke Feenstra
Astanand Jugessur
Aase S Devold Pay
Ingrid H G Ostensen
Nils-Halvdan Morken
Tamara Busch
Kelli K Ryckman
Frank Geller
Per Magnus
Håkon K Gjessing
Mads Melbye
Bo Jacobsson
Jeffrey C Murray
Norwegian Institute of Public Health · NOStatens Serum Institut · DKUniversity of Iowa · USHaukeland University Hospital · NOOslo University Hospital · NORoyal Children's Hospital · AU

Funding

Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Brandi Janssen · 1990 to 2026
$40.5M
Gene-Environment Interactions in an Autism Birth CohortU01NS047537 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LIPKIN, W. IAN · 2003 to 2013
$27.0M
JH/CIDR Genotyping for Genome-Wide Association StudiesU01HG004438 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2007 to 2011
$24.2M
A Center for GEI Association StudiesU01HG004424 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY · 2007 to 2010
$21.4M
Genome Wide Association Coordinating CenterU01HG004446 · NHGRI · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2007 to 2011
$6.6M
Maternal and fetal genetic factors in preterm birthR01HD052953 · NICHD · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2006 to 2010
$2.8M
A Family and Population Approach to Gene Discovery for Preterm BirthR01HD057192 · NICHD · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2009 to 2011
$1.8M
NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS U01 HG004424NHGRI NIH HHS U01 HG004438NHGRI NIH HHS U01HG004438NHGRI NIH HHS U01 HG004446NHGRI NIH HHS U01HG04424NICHD NIH HHS HD52953NICHD NIH HHS HD57192NICHD NIH HHS R01 HD052953NICHD NIH HHS R01 HD057192NIEHS NIH HHS 05 ES236011NIEHS NIH HHS N01 ES075558NIEHS NIH HHS N0-ES-75558NIEHS NIH HHS P30 ES005605NINDS NIH HHS 1 UO1 NS 047537-01NINDS NIH HHS U01 NS047537PHS HHS 268200782096C
6 · The paper itself

Abstract

backgroundRecent epidemiological studies suggest that the maternal genome is an important contributor to spontaneous preterm delivery (PTD). There is also a significant excess of males among preterm born infants, which may imply an X-linked mode of inheritance for a subset of cases. To explore this, we examined the effect of maternal and fetal X-chromosomal single nucleotide polymorphisms (SNPs) on the risk of PTD in two independent genome-wide association studies and one replication study.

methodsParticipants were recruited from the Danish National Birth Cohort and the Norwegian Mother and Child cohort studies. Data from these two populations were first analyzed independently, and then combined in a meta-analysis. Overall, we evaluated 12,211 SNPs in 1,535 case-mother dyads and 1,487 control-mother dyads. Analyses were done using a hybrid design that combines case-mother dyads and control-mother dyads, as implemented in the Haplin statistical software package. A sex-stratified analysis was performed for the fetal SNPs. In the replication study, 10 maternal and 16 fetal SNPs were analyzed using case-parent triads from independent studies of PTD in the United States, Argentina and Denmark.

resultsIn the meta-analysis, the G allele at the maternal SNP rs2747022 in the FERM domain containing 7 gene (FRMD7) increased the risk of spontaneous PTD by 1.2 (95% confidence interval (CI): 1.1, 1.4). Although an association with this SNP was confirmed in the replication study, it was no longer statistically significant after a Bonferroni correction for multiple testing.

conclusionWe did not find strong evidence in our data to implicate X-chromosomal SNPs in the etiology of spontaneous PTD. Although non-significant after correction for multiple testing, the mother's G allele at rs2747022 in FRMD7 increased the risk of spontaneous PTD across all populations in this study, thus warranting further investigation in other populations.

Indexed as

AdolescentAdultFemaleGenes, X-LinkedGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansInfant, NewbornMalePolymorphism, Single NucleotidePregnancyPremature BirthWhite PeopleYoung Adult

Identifiers

PMID23613933
PMCPMC3628886
OpenAlexW2101507977

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.