Evidence map›Paper›PMID 23612575›Full record

ArticleEuropean journal of human genetics : EJHG2014

Analysis of all subunits, SDHA, SDHB, SDHC, SDHD, of the succinate dehydrogenase complex in KIT/PDGFRA wild-type GIST.

Maria A Pantaleo, Annalisa Astolfi, Milena Urbini, Margherita Nannini, Paola Paterini, Valentina Indio, Maristella Saponara, Serena Formica, Claudio Ceccarelli, Rita Casadio and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 105 citations in OpenAlex.

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  18. Oncology letters · 2022
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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Maria A PantaleoDepartment of Specialized, Experimental and Diagnostic Medicine, Sant'Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy.
Annalisa Astolfi8216;Giorgio Prodi' Cancer Research Center, University of Bologna, Bologna, Italy.
Milena Urbini8216;Giorgio Prodi' Cancer Research Center, University of Bologna, Bologna, Italy.
Margherita NanniniDepartment of Specialized, Experimental and Diagnostic Medicine, Sant'Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy.
Paola Paterini8216;Giorgio Prodi' Cancer Research Center, University of Bologna, Bologna, Italy.
Valentina Indio8216;Giorgio Prodi' Cancer Research Center, University of Bologna, Bologna, Italy.
Maristella SaponaraDepartment of Specialized, Experimental and Diagnostic Medicine, Sant'Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy.
Serena Formica8216;Giorgio Prodi' Cancer Research Center, University of Bologna, Bologna, Italy.
Claudio CeccarelliPathology Unit, Sant'Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy.
Rita CasadioBiocomputing Group, Department of Biology, University of Bologna, Bologna, Italy.
Giulio RossiSection of Pathologic Anatomy and Division of Oncology, Azienda Ospedaliero-Universitaria Policlinico di Modena, Modena, Italy.
Federica BertoliniSection of Pathologic Anatomy and Division of Oncology, Azienda Ospedaliero-Universitaria Policlinico di Modena, Modena, Italy.
Donatella SantiniPathology Unit, Sant'Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy.
Maria G PiriniPathology Unit, Sant'Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy.
Michelangelo FiorentinoLaboratorio di Patologia Molecolare Oncologica e dei Trapianti-Pathology Unit, Sant'Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy.
Umberto BassoOncologia Medica 1, Istituto Oncologico Veneto IOV I.R.C.C.S., Padova, Italy.
Guido Biasco1] Department of Specialized, Experimental and Diagnostic Medicine, Sant'Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy [2] 'Giorgio Prodi' Cancer Research Center, University of Bologna, Bologna, Italy.
GIST Study Group
IRCCS Azienda Ospedliero-Universitaria di Bologna Policlinico di Sant'Orsola · ITAzienda Ospedaliero-Universitaria di Modena · ITUniversity of Bologna · ITIstituto Oncologico Veneto · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations of genes encoding the subunits of the succinate dehydrogenase (SDH) complex were described in KIT/PDGFRA wild-type GIST separately in different reports. In this study, we simultaneously sequenced the genome of all subunits, SDHA, SDHB, SDHC, and SDHD in a larger series of KIT/PDGFRA wild-type GIST in order to evaluate the frequency of the mutations and explore their biological role. SDHA, SDHB, SDHC, and SDHD were sequenced on the available samples obtained from 34 KIT/PDGFRA wild-type GISTs. Of these, in 10 cases, both tumor and peripheral blood (PB) were available, in 19 cases only tumor, and in 5 cases only PB. Overall, 9 of the 34 patients with KIT/PDGFRA wild-type GIST carried mutations in one of the four subunits of the SDH complex (six patients in SDHA, two in SDHB, one in SDHC). WB and immunohistochemistry analysis showed that patients with KIT/PDGFRA wild-type GIST who harbored SDHA mutations exhibited a significant downregulation of both SDHA and SDHB protein expression, with respect to the other GIST lacking SDH mutations and to KIT/PDGFRA-mutated GIST. Clinically, four out of six patients with SDHA mutations presented with metastatic disease at diagnosis with a very slow, indolent course. Patients with KIT/PDGFRA wild-type GIST may harbor germline and/or de novo mutations of SDH complex with prevalence for mutations within SDHA, which is associated with a downregulation of SDHA and SDHB protein expression. The presence of germline mutations may suggest that these patients should be followed up for the risk of development of other cancers.

Indexed as

AdolescentAdultAgedDNA Mutational AnalysisElectron Transport Complex IIFemaleGastrointestinal Stromal TumorsGene Expression RegulationGenetic Association StudiesGerm-Line MutationHumansMaleMembrane ProteinsMiddle AgedMutationProto-Oncogene Proteins c-kitElectron Transport Complex IIMembrane ProteinsProto-Oncogene Proteins c-kitReceptor, Platelet-Derived Growth Factor alphaSDHA protein, humanSDHB protein, humanSDHC protein, humanSDHD protein, humanSuccinate Dehydrogenase

Identifiers

PMID23612575
PMCPMC3865408
OpenAlexW2015994205

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.