Evidence map›Paper›PMID 23612307›Full record

ArticleNature communications2013

The four-transmembrane protein IP39 of Euglena forms strands by a trimeric unit repeat.

Hiroshi Suzuki, Yasuyuki Ito, Yuji Yamazaki, Katsuhiko Mineta, Masami Uji, Kazuhiro Abe, Kazutoshi Tani, Yoshinori Fujiyoshi, Sachiko Tsukita

Abstract read
In one paragraph

Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. The response of claudin-like transmembrane septate junction proteins to altered environmental ion levels in the larval mosquito Aedes aegypti.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2016
    Article
  3. Article
  4. Article
  5. Article
  6. The kidney tight junction (Review).International journal of molecular medicine · 2014
    Review
  7. Epithelial adhesive junctions.F1000prime reports · 2014
    Review
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hiroshi SuzukiCellular and Structural Physiology Institute, Nagoya University, Nagoya 464-8601, Japan.
Yasuyuki Ito
Yuji Yamazaki
Katsuhiko Mineta
Masami Uji
Kazuhiro Abe
Kazutoshi Tani
Yoshinori Fujiyoshi
Sachiko Tsukita

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Euglenoid flagellates have striped surface structures comprising pellicles, which allow the cell shape to vary from rigid to flexible during the characteristic movement of the flagellates. In Euglena gracilis, the pellicular strip membranes are covered with paracrystalline arrays of a major integral membrane protein, IP39, a putative four-membrane-spanning protein with the conserved sequence motif of the PMP-22/EMP/MP20/Claudin superfamily. Here we report the three-dimensional structure of Euglena IP39 determined by electron crystallography. Two-dimensional crystals of IP39 appear to form a striated pattern of antiparallel double-rows in which trimeric IP39 units are longitudinally polymerised, resulting in continuously extending zigzag-shaped lines. Structural analysis revealed an asymmetric molecular arrangement in the trimer, and suggested that at least four different interactions between neighbouring protomers are involved. A combination of such multiple interactions would be important for linear strand formation of membrane proteins in a lipid bilayer.

Indexed as

Protein MultimerizationRepetitive Sequences, Amino AcidAntibodies, Phospho-SpecificCrystallizationCrystallography, X-RayEuglena gracilisMembrane ProteinsModels, MolecularPhosphotyrosineProtein BindingProtein SubunitsProtozoan ProteinsStructural Homology, ProteinAntibodies, Phospho-SpecificMembrane ProteinsPhosphotyrosineProtein SubunitsProtozoan Proteins

Identifiers

PMID23612307
PMCPMC3644091

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.