Evidence map›Paper›PMID 23610439›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Microhomology-mediated End Joining and Homologous Recombination share the initial end resection step to repair DNA double-strand breaks in mammalian cells.

Lan N Truong, Yongjiang Li, Linda Z Shi, Patty Yi-Hwa Hwang, Jing He, Hailong Wang, Niema Razavian, Michael W Berns, Xiaohua Wu

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 320 papers.

0numbers the graph read from it
0cells of the map it votes in
320citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

320 citing papers in PubMed.

  1. DNA Repair Mechanisms.Methods in molecular biology (Clifton, N.J.) · 2027
    Review
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Science advances · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Dynamic Assemblies in Genome Maintenance.Advances in experimental medicine and biology · 2026
    Review
  17. Article
  18. Article
  19. Article
  20. Review

260 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lan N TruongDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Yongjiang Li
Linda Z Shi
Patty Yi-Hwa Hwang
Jing He
Hailong Wang
Niema Razavian
Michael W Berns
Xiaohua Wu

Funding

Role of the Mre11/Rad50/Nbs1 complex in DNA damage response pathwaysR01CA102361 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2003 to 2012
$4.1M
S-phase checkpoint and rereplication in mammalian cellsR01GM080677 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2010 to 2018
$2.9M
SUPPLEMENT TO INVESTIGATIVE HEMATOLOGYT32DK007022 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI SOLOMON, DANIEL RENEE · 1986 to 2009
$2.3M
Role of BRCA1 and its association protein CtlP in DNA double-strand break repairR01CA140972 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2010 to 2014
$2.2M
NCI NIH HHS CA102361NCI NIH HHS CA102361-07S1NCI NIH HHS CA140972NCI NIH HHS R01 CA102361NCI NIH HHS R01 CA140972NIDDK NIH HHS DK007022-30NIDDK NIH HHS T32 DK007022NIGMS NIH HHS GM080677NIGMS NIH HHS R01 GM080677
6 · The paper itself

Abstract

Microhomology-mediated end joining (MMEJ) is a major pathway for Ku-independent alternative nonhomologous end joining, which contributes to chromosomal translocations and telomere fusions, but the underlying mechanism of MMEJ in mammalian cells is not well understood. In this study, we demonstrated that, distinct from Ku-dependent classical nonhomologous end joining, MMEJ--even with very limited end resection--requires cyclin-dependent kinase activities and increases significantly when cells enter S phase. We also showed that MMEJ shares the initial end resection step with homologous recombination (HR) by requiring meiotic recombination 11 homolog A (Mre11) nuclease activity, which is needed for subsequent recruitment of Bloom syndrome protein (BLM) and exonuclease 1 (Exo1) to DNA double-strand breaks (DSBs) to promote extended end resection and HR. MMEJ does not require S139-phosphorylated histone H2AX (γ-H2AX), suggesting that initial end resection likely occurs at DSB ends. Using a MMEJ and HR competition repair substrate, we demonstrated that MMEJ with short end resection is used in mammalian cells at the level of 10-20% of HR when both HR and nonhomologous end joining are available. Furthermore, MMEJ is used to repair DSBs generated at collapsed replication forks. These studies suggest that MMEJ not only is a backup repair pathway in mammalian cells, but also has important physiological roles in repairing DSBs to maintain cell viability, especially under genomic stress.

Indexed as

DNA Breaks, Double-StrandedDNA End-Joining RepairGene Expression Regulation, EnzymologicHomologous RecombinationAnimalsAntigens, NuclearCarrier ProteinsCell Line, TumorCyclin-Dependent Kinase 2DNA-Binding ProteinsDNA Repair EnzymesEndodeoxyribonucleasesExodeoxyribonucleasesFibroblastsGreen Fluorescent ProteinsHistonesAntigens, NuclearBloom syndrome proteinCarrier ProteinsCDK2 protein, humanCyclin-Dependent Kinase 2DNA-Binding ProteinsDNA Repair EnzymesEndodeoxyribonucleasesEXO1 protein, humanExodeoxyribonucleasesGreen Fluorescent ProteinsH2AX protein, humanHistonesKu AutoantigenMRE11 Homologue ProteinMRE11 protein, humanNuclear ProteinsRBBP8 protein, humanRecQ HelicasesXrcc6 protein, humanXrcc6 protein, mouseBLM/Exo1CtIPDNA damageDNA repair pathwaygenome stability

Identifiers

PMID23610439
PMCPMC3651503

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.