Evidence map›Paper›PMID 23609442›Full record

ArticleThe Journal of biological chemistry2013

Dynamic structure of the translocon SecYEG in membrane: direct single molecule observations.

Raghavendar Reddy Sanganna Gari, Nathan C Frey, Chunfeng Mao, Linda L Randall, Gavin M King

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. TheeLife · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Protein Translocation Activity in Surface-Supported Lipid Bilayers.Langmuir : the ACS journal of surfaces and colloids · 2019
    Article
  10. Direct visualization of theScience advances · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Protein export through the bacterial Sec pathway.Nature reviews. Microbiology · 2017
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Raghavendar Reddy Sanganna GariDepartments of Physics and Astronomy, Columbia, Missouri 65211.
Nathan C FreyDepartments of Physics and Astronomy, Columbia, Missouri 65211.
Chunfeng MaoBiochemistry, University of Missouri, Columbia, Missouri 65211.
Linda L RandallBiochemistry, University of Missouri, Columbia, Missouri 65211.
Gavin M KingDepartments of Physics and Astronomy, Columbia, Missouri 65211; Biochemistry, University of Missouri, Columbia, Missouri 65211. Electronic address: kinggm@missouri.edu.

Funding

The Export of Proteins in Escherichia Coli; Administrative Supplement for EquipmentR01GM029798 · NIGMS · WASHINGTON STATE UNIVERSITY · PI RANDALL, LINDA L. · 1985 to 2019
$7.7M
EXPORT OF PROTEINS IN ESCHERICHIA COLIR37GM029798 · NIGMS · WASHINGTON STATE UNIVERSITY · PI RANDALL, LINDA L. · 1993 to 2002
$1.1M
NIGMS NIH HHS GM29798NIGMS NIH HHS R01 GM029798NIGMS NIH HHS R37 GM029798
6 · The paper itself

Abstract

Purified SecYEG was reconstituted into liposomes and studied in near-native conditions using atomic force microscopy. These SecYEG proteoliposomes were active in translocation assays. Changes in the structure of SecYEG as a function of time were directly visualized. The dynamics observed were significant in magnitude (∼1-10 Å) and were attributed to the two large loops of SecY linking transmembrane helices 6-7 and 8-9. In addition, we identified a distribution between monomers and dimers of SecYEG as well as a smaller population of higher order oligomers. This work provides a new vista of the flexible and dynamic structure of SecYEG, an intricate and vital membrane protein.

Indexed as

Biological Transport, ActiveEscherichia coliEscherichia coli ProteinsMembrane ProteinsMicroscopy, Atomic ForceMultiprotein ComplexesProtein Structure, QuaternarySEC Translocation ChannelsEscherichia coli ProteinsMembrane ProteinsMultiprotein ComplexesSecE protein, E coliSecG protein, E coliSEC Translocation ChannelsSecY protein, E coliAtomic Force MicroscopyMembrane BiophysicsMembrane ProteinsProtein ConformationProtein DynamicsProtein ExportSecretionStructural Biology

Identifiers

PMID23609442
PMCPMC3675617

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.