Evidence map›Paper›PMID 23608491›Full record

ArticleJournal of dairy science2013

Isolation and characterization of Staphylococcus aureus strains from a Paso del Norte dairy.

S A Matyi, J M Dupre, W L Johnson, P R Hoyt, D G White, T Brody, W F Odenwald, J E Gustafson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of dairy science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 35 citations in OpenAlex.

  1. Foods (Basel, Switzerland) · 2023
    Article
  2. Article
  3. Prevalence of methicillin-resistantFrontiers in veterinary science · 2022
    Article
  4. Article
  5. Article
  6. Risk Factors for the Occurrence of Methicillin-ResistantFoodborne pathogens and disease · 2020
    Review
  7. Article
  8. Article
  9. Frontiers in microbiology · 2017
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

S A MatyiDepartment of Biology, New Mexico State University, Las Cruces 88003, USA.
J M Dupre
W L Johnson
P R Hoyt
D G White
T Brody
W F Odenwald
J E Gustafson
New Mexico State University · USNational Institutes of Health · USCenter for Veterinary Medicine · US

Funding

NM-INBRE Sequencing and Bioinformatics CoreP20GM103451 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI Charlotte C. Gard · 2012 to 2026
$61.2M
ZUNI HEALTH INITIATIVE-PILOT STUDYP20RR016480 · NCRR · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI ZHANG, PENG F · 2001 to 2011
$33.7M
RISE PROGRAM AT NEW MEXICO STATE UNIVERSITYR25GM061222 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI HOUSTON, JESSICA PEREA, REDDI, LAKSHMI · 2000 to 2022
$21.3M
Undergraduate Biomedical Research Training at New Mexico State Univ., Las CrucesT34GM007667 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI UNGUEZ, GRACIELA ALEXANDRA · 1985 to 2022
$13.6M
Analysis of Neural Precursor Cell cis-Regulatory EnhancersZIANS002820 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI ODENWALD, WARD F · 2010 to 2017
$5.3M
Identification of Functionally Related Drosophila cis-Regulatory DNAZIANS009413 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI ODENWALD, WARD F · 2011 to 2017
$3.6M
Intramural NIH HHS ZIA NS009413NCRR NIH HHS 5P20RR016480-12NCRR NIH HHS P20 RR016480NIGMS NIH HHS 8P20GM103451NIGMS NIH HHS P20 GM103451NIGMS NIH HHS R25 GM061222NIGMS NIH HHS R25 GM07667-30NIGMS NIH HHS S06-GM61222-05NIGMS NIH HHS SC-1GM083882-01NIGMS NIH HHS T34 GM007667
6 · The paper itself

Abstract

The primary purpose of this study was to determine if methicillin-resistant Staphylococcus aureus (MRSA) strains could be identified in the milk of dairy cattle in a Paso del Norte region dairy of the United States. Using physiological and PCR-based identification schemes, a total of 40 Staph. aureus strains were isolated from 29 raw milk samples of 133 total samples analyzed. Pulsed-field gel electrophoresis after digestion with the SmaI enzyme revealed that the 40 confirmed strains were represented by 5 pulsed-field types, which each contained 3 or more strains. Of 7 hospital strains isolated from cows undergoing antibiotic therapy, 3 demonstrated resistance to 3 or more antimicrobial classes and displayed similar pulsed-field gel electrophoresis patterns. A secondary purpose of this study was to elucidate the evolutionary relationships of strains isolated in this study to genomically characterized Staph. aureus strains. Therefore, Roche 454 GS (Roche Diagnostics Corp., Dallas, TX) pyrosequencing was used to produce draft genome sequences of an MRSA raw milk isolate (H29) and a methicillin-susceptible Staph. aureus (PB32). Analysis using the BLASTn database (http://blast.ncbi.nlm.nih.gov/) demonstrated that the H29 draft genome was highly homologous to the human MRSA strain JH1, yet the β-lactamase plasmid carried by H29 was different from that carried by JH1. Genomic analysis of H29 also clearly explained the multidrug resistance phenotype of this raw milk isolate. Analysis of the PB32 draft genome (using BLASTn) demonstrated that this raw milk isolate was most related to human MRSA strain 04-02981. Although PB32 is not a MRSA, the PB32 draft genome did reveal the presence of a unique staphylococcal cassette mec (SCCmec) remnant. In addition, the PB32 draft genome revealed the presence of a novel bovine staphylococcal pathogenicity island, SaPIbovPB32. This study demonstrates the presence of clones closely related to human and (or) bovine Staph. aureus strains circulating in a dairy herd.

Indexed as

AnimalsBase SequenceCattleDairyingDNA, BacterialElectrophoresis, Gel, Pulsed-FieldFemaleHumansMastitis, BovineMethicillin-Resistant Staphylococcus aureusMilkMolecular Sequence DataPolymerase Chain ReactionSequence HomologyStaphylococcus aureusUnited StatesDNA, Bacterial

Identifiers

PMID23608491
PMCPMC5226338
OpenAlexW2057332505

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.