Evidence map›Paper›PMID 23606288›Full record

ArticleEukaryotic cell2013

A central role for Ras1 in morphogenesis of the basidiomycete Schizophyllum commune.

Nicole Knabe, Elke-Martina Jung, Daniela Freihorst, Florian Hennicke, J Stephen Horton, Erika Kothe

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 47 citations in OpenAlex.

  1. Evidence for the Existence of Mating Subtypes Within theJournal of fungi (Basel, Switzerland) · 2025
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  5. Inositol Signaling in the Basidiomycete FungusJournal of fungi (Basel, Switzerland) · 2021
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  6. What Role Might Non-Mating Receptors Play inJournal of fungi (Basel, Switzerland) · 2021
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  7. The Pacific Tree-Parasitic FungusJournal of fungi (Basel, Switzerland) · 2021
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  16. Hartig' net formation of Tricholoma vaccinum-spruce ectomycorrhiza in hydroponic cultures.Environmental science and pollution research international · 2015
    Article
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  18. Cancer across the tree of life: cooperation and cheating in multicellularity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Nicole KnabeInstitute of Microbiology, Friedrich Schiller University, Jena, Germany.
Elke-Martina Jung
Daniela Freihorst
Florian Hennicke
J Stephen Horton
Erika Kothe
Friedrich Schiller University Jena · DELeibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Knöll-Institut (HKI) · DEUnion College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fungi have been used as model systems to define general processes in eukaryotes, for example, the one gene-one enzyme hypothesis, as well as to study polar growth or pathogenesis. Here, we show a central role for the regulator protein Ras in a mushroom-forming, filamentous basidiomycete linking growth, pheromone signaling, sexual development, and meiosis to different signal transduction pathways. ras1 and Ras-specific gap1 mutants were generated and used to modify the intracellular activation state of the Ras module. Transformants containing constitutive ras1 alleles (ras1(G12V) and ras1(Q61L)), as well as their compatible mating interactions, did show strong phenotypes for growth (associated with Cdc42 signaling) and mating (associated with mitogen-activated protein kinase signaling). Normal fruiting bodies with abnormal spores exhibiting a reduced germination rate were produced by outcrossing of these mutant strains. Homozygous Δgap1 primordia, expected to experience increased Ras signaling, showed overlapping phenotypes with a block in basidium development and meiosis. Investigation of cyclic AMP (cAMP)-dependent protein kinase A indicated that constitutively active ras1, as well as Δgap1 mutant strains, exhibit a strong increase in Tpk activity. Ras1-dependent, cAMP-mediated signal transduction is, in addition to the known signaling pathways, involved in fruiting body formation in Schizophyllum commune. To integrate these analyses of Ras signaling, microarray studies were performed. Mutant strains containing constitutively active Ras1, deletion of RasGap1, or constitutively active Cdc42 were characterized and compared. At the transcriptome level, specific regulation highlighting the phenotypic differences of the mutants is clearly visible.

Indexed as

Gene Expression Regulation, FungalAllelesAmino Acid Transport Systemscdc42 GTP-Binding ProteinCyclic AMPFruiting Bodies, FungalFungal ProteinsGene Expression ProfilingGene Expression Regulation, DevelopmentalMeiosisMorphogenesisMutationOligonucleotide Array Sequence Analysisras ProteinsSchizophyllumSex AttractantsAmino Acid Transport Systemscdc42 GTP-Binding ProteinCyclic AMPFungal Proteinsras ProteinsSex Attractants

Identifiers

PMID23606288
PMCPMC3675993
OpenAlexW2048102908

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.