ArticleJournal of structural and functional genomics2013
Structural and functional based identification of the bean (Phaseolus) microRNAs and their targets from expressed sequence tags.
Article in Journal of structural and functional genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
What it found
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Who cites it
9 citing papers in PubMed.
- Bioinformatic prediction, annotation and experimental validation of conserved microRNAs in Lactuca sativa Linn.Scientific reports · 2025Article
- Identification and Characterization of Evolutionary Conserved Muskmelon Non-coding miRNAs and Their Target Proteins.Biochemical genetics · 2025Article
- Identification of Long Non-coding RNA Transcripts inIranian journal of biotechnology · 2022Article
- Article
- Identification and functional analyses of new sesame miRNAs (Sesamum indicum L.) and their targets.Molecular biology reports · 2018Article
- In-silico based identification and functional analyses of miRNAs and their targets in Cowpea (AIMS genetics · 2017Article
- Computational identification and characterization of novel microRNA in the mammary gland of dairy goat (Capra hircus).Journal of genetics · 2016Article
- Computational prediction of miRNAs and their targets in Phaseolus vulgaris using simple sequence repeat signatures.BMC plant biology · 2015Article
- Profiling and characterization of eggplant (Solanum melongena L.) microRNAs and their targets.Molecular biology reports · 2014Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MicroRNAs (miRNAs) are small, 18-26 nucleotides long, non-coding RNAs that play role in post-transcriptional gene regulation. Many of these are evolutionarily conserved. This suggests a powerful approach to predict new miRNAs in other species. In this research, structural and functional approaches were combined to make computational prediction of potential miRNAs and their targets in Bean (Phaseolus). Total 55 novel miRNAs were detected from 38 miRNAs families in Bean (Phaseolus). These families are; miR156, 160, 164, 168, 170, 171, 172, 319, 393, 396, 397, 398, 408, 414, 438, 444, 535, 1310, 1424, 1426, 1848, 1860, 1863, 2055, 2091, 2093, 2094, 2102, 2103, 2105, 2864, 2866, 2925, 2926, 4221, 4245, 4246 and 4250. In the 55 putative miRNAs; 28 miRNAs belong to Phaseolus acutifolius, 23 to Phaseolus vulgaris, 4 to Phaseolus coccineus. All the mature miRNAs reside in the stem portion of the hairpin structures. Total 146 potential protein targets were predicted for these miRNAs.
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Registered trials
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