Evidence map›Paper›PMID 23604065›Full record

ArticleToxins2013

Phylogenetic study of polyketide synthases and nonribosomal peptide synthetases involved in the biosynthesis of mycotoxins.

Antonia Gallo, Massimo Ferrara, Giancarlo Perrone

Open access · goldAbstract read
In one paragraph

Article in Toxins, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Article
  3. Phylogeny ofMycology · 2025
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Genomic Analysis of theMycobiology · 2023
    Article
  9. Putative CToxins · 2022
    Article
  10. Review
  11. High Diversity of Type I Polyketide Genes inJournal of fungi (Basel, Switzerland) · 2022
    Article
  12. Article
  13. Genomic Analysis of the MycoparasitePolish journal of microbiology · 2021
    Article
  14. Review
  15. Fungal Toxins and Host Immune Responses.Frontiers in microbiology · 2021
    Review
  16. Toxins · 2020
    Review
  17. Divergence of Beauvericin Synthase Gene amongJournal of fungi (Basel, Switzerland) · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Antonia GalloInstitute of Sciences of Food Production ISPA, National Research Council CNR, Bari, Italy. antonia.gallo@ispa.cnr.it
Massimo Ferrara
Giancarlo Perrone
Institute of Sciences of Food Production · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyketide synthase (PKSs) and nonribosomal peptide synthetase (NRPSs) are large multimodular enzymes involved in biosynthesis of polyketide and peptide toxins produced by fungi. Furthermore, hybrid enzymes, in which a reducing PKS region is fused to a single NRPS module, are also responsible of the synthesis of peptide-polyketide metabolites in fungi. The genes encoding for PKSs and NRPSs have been exposed to complex evolutionary mechanisms, which have determined the great number and diversity of metabolites. In this study, we considered the most important polyketide and peptide mycotoxins and, for the first time, a phylogenetic analysis of both PKSs and NRPSs involved in their biosynthesis was assessed using two domains for each enzyme: β-ketosynthase (KS) and acyl-transferase (AT) for PKSs; adenylation (A) and condensation (C) for NRPSs. The analysis of both KS and AT domains confirmed the differentiation of the three classes of highly, partially and non-reducing PKSs. Hybrid PKS-NRPSs involved in mycotoxins biosynthesis grouped together in the phylogenetic trees of all the domains analyzed. For most mycotoxins, the corresponding biosynthetic enzymes from distinct fungal species grouped together, except for PKS and NRPS involved in ochratoxin A biosynthesis, for which an unlike process of evolution could be hypothesized in different species.

Indexed as

Genes, FungalPhylogenyAmino Acid SequenceDatabases, ProteinFungal ProteinsFungiMycotoxinsOchratoxinsPeptide SynthasesPolyketide SynthasesProtein Structure, TertiarySequence AlignmentFungal ProteinsMycotoxinsochratoxin AOchratoxinsPeptide SynthasesPolyketide Synthases

Identifiers

PMID23604065
PMCPMC3705289
OpenAlexW2016585370

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.