Evidence map›Paper›PMID 23603659›Full record

ArticleNature chemical biology2013

Chemical genetics reveals a kinase-independent role for protein kinase R in pyroptosis.

Erik C Hett, Louise H Slater, Kevin G Mark, Tomohiko Kawate, Brian G Monks, Andrea Stutz, Eicke Latz, Deborah T Hung

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Review
  3. RNA recognition by PKR during DNA virus infection.Journal of medical virology · 2024
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Gasdermin D in pyroptosis.Acta pharmaceutica Sinica. B · 2021
    Review
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. The Role of Protein Tyrosine Phosphatases in Inflammasome Activation.International journal of molecular sciences · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Erik C HettDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, USA. hett@molbio.mgh.harvard.edu
Louise H Slater
Kevin G Mark
Tomohiko Kawate
Brian G Monks
Andrea Stutz
Eicke Latz
Deborah T Hung
Broad Institute · USHarvard University · USUniversity of Bonn · DEInstitute of Science and Ethics · DEMassachusetts General Hospital · US

Funding

Treatments for Nipah Virus InfectionU54AI057159 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI KIRCHHAUSEN, TOMAS · 2003 to 2013
$113.7M
Identifying Host-Factors Required for Toxin Entry and ToxicityF32AI084323 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI HETT, ERIK · 2009 to 2010
$102k
NIAID NIH HHS F32 AI084323NIAID NIH HHS F32AI084323NIAID NIH HHS U54 AI057159
6 · The paper itself

Abstract

Formation of the inflammasome, a scaffolding complex that activates caspase-1, is important in numerous diseases. Pyroptotic cell death induced by anthrax lethal toxin (LT) is a model for inflammasome-mediated caspase-1 activation. We discovered 7-desacetoxy-6,7-dehydrogedunin (7DG) in a phenotypic screen as a small molecule that protects macrophages from LT-induced death. Using chemical proteomics, we identified protein kinase R (PKR) as the target of 7DG and show that RNAi knockdown of PKR phenocopies treatment with 7DG. Further, we show that PKR's role in ASC assembly and caspase-1 activation induced by several different inflammasome stimuli is independent of PKR's kinase activity, demonstrating that PKR has a previously uncharacterized role in caspase-1 activation and pyroptosis that is distinct from its reported kinase-dependent roles in apoptosis and inflammasome formation in lipopolysaccharide-primed cells. Remarkably, PKR has different roles in two distinct cell death pathways and has a broad role in inflammasome function relevant in other diseases.

Indexed as

Cell DeathAnimalsBacillus anthracisCaspase 1Catalytic DomainCell LineeIF-2 KinaseEnzyme-Linked Immunosorbent AssayHSP90 Heat-Shock ProteinsHydrogen-Ion ConcentrationInflammationMacrophagesMiceMice, Inbred BALB CModels, BiologicalPeptide HydrolasesCaspase 1eIF-2 KinaseHSP90 Heat-Shock ProteinsPeptide HydrolasesProteasome Endopeptidase Complex

Identifiers

PMID23603659
PMCPMC6615456
OpenAlexW2043887616

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.