Evidence map›Paper›PMID 23603017›Full record

ReviewJournal of molecular biology2013

The replication domain model: regulating replicon firing in the context of large-scale chromosome architecture.

Benjamin D Pope, David M Gilbert

Abstract readReview
In one paragraph

Review in Journal of molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Genomic methods for measuring DNA replication dynamics.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Review
  6. Control of DNA replication timing in the 3D genome.Nature reviews. Molecular cell biology · 2019
    Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. DNA Replication: From Radioisotopes to Click Chemistry.Molecules (Basel, Switzerland) · 2018
    Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Benjamin D PopeDepartment of Biological Science, Florida State University, 319 Stadium Drive, Tallahassee, FL 32306-4295, USA.
David M Gilbert
Florida State University · US

Funding

UNDERSTANDING MECHANISMS OF hESC SELF-RENEWAL AND CELL FATE COMMITMENTP01GM085354 · NIGMS · UNIVERSITY OF GEORGIA · PI DALTON, STEPHEN · 2008 to 2018
$18.3M
Genome Plasticity during ES Cell Differentiation to Neural LineagesR01GM083337 · NIGMS · SAN DIEGO BIOMEDICAL RESEARCH INSTITUTE · PI David M Gilbert · 2007 to 2026
$6.1M
Replication Profiling as a Diagnostic Tool in B-cell Acute Lymphoblastic LeukemiaR21CA161666 · NCI · FLORIDA STATE UNIVERSITY · PI GILBERT, DAVID M · 2013 to 2014
$341k
DNA elements linking regulation of replication timing to oncogene functionF31CA165863 · NCI · FLORIDA STATE UNIVERSITY · PI POPE, BENJAMIN DANIEL · 2012 to 2013
$72k
NCI NIH HHS CA161666NCI NIH HHS F31 CA165863NCI NIH HHS F31CA165863NCI NIH HHS R21 CA161666NIGMS NIH HHS GM083337NIGMS NIH HHS GM085354NIGMS NIH HHS P01 GM085354NIGMS NIH HHS R01 GM083337
6 · The paper itself

Abstract

The "Replicon Theory" of Jacob, Brenner, and Cuzin has reliably served as the paradigm for regulating the sites where individual replicons initiate replication. Concurrent with the replicon model was Taylor's demonstration that plant and animal chromosomes replicate segmentally in a defined temporal sequence, via cytologically defined units too large to be accounted for by a single replicon. Instead, there seemed to be a program to choreograph when chromosome units replicate during S phase, executed by initiation at clusters of individual replicons within each segment. Here, we summarize recent molecular evidence for the existence of such units, now known as "replication domains", and discuss how the organization of large chromosomes into structural units has added additional layers of regulation to the original replicon model.

Indexed as

ChromosomesDNA ReplicationReplication OriginRepliconBacteriaDNA Replication TimingEukaryotachromosome domainoriginreplication timingreplicon

Identifiers

PMID23603017
PMCPMC3775993
OpenAlexW2004739212

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.