Evidence map›Paper›PMID 23600697›Full record

ArticleMolecular microbiology2013

Architecture and assembly of the Gram-positive cell wall.

Morgan Beeby, James C Gumbart, Benoît Roux, Grant J Jensen

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 136 citations in OpenAlex.

  1. MemPrO: A Predictive Tool for Membrane Protein Orientation.Journal of chemical theory and computation · 2026
    Article
  2. Review
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  4. Revealing the Response Mechanism ofFoods (Basel, Switzerland) · 2025
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  14. Inhibition ofMicrobiology (Reading, England) · 2022
    Article
  15. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Morgan BeebyCalifornia Institute of Technology and Howard Hughes Medical Institute, 1200 E California Blvd, Pasadena, CA 91125, USA.
James C Gumbart
Benoît Roux
Grant J Jensen
Argonne National Laboratory · USCalifornia Institute of Technology · USHoward Hughes Medical Institute · USUniversity of Chicago · US

Funding

Computational Studies of Ion Channels - Resubmission 01R01GM062342 · NIGMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI ROUX, BENOIT · 2001 to 2022
$8.7M
Beagle: A Supercomputer for Computational Biology, Simulation, and Data AnalysisS10RR029030 · NCRR · UNIVERSITY OF CHICAGO · PI FOSTER, IAN · 2010 to 2010
$7.0M
Structural Components of the Campylobacter jejuni Polar Flagellar MotorR21AI103643 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI HENDRIXSON, DAVID R · 2013 to 2014
$333k
Howard Hughes Medical InstituteNCRR NIH HHS S10 RR029030NCRR NIH HHS S10 RR029030-01NIAID NIH HHS 1R21AI103643NIGMS NIH HHS R01 GM062342
6 · The paper itself

Abstract

The bacterial cell wall is a mesh polymer of peptidoglycan--linear glycan strands cross-linked by flexible peptides--that determines cell shape and provides physical protection. While the glycan strands in thin 'Gram-negative' peptidoglycan are known to run circumferentially around the cell, the architecture of the thicker 'Gram-positive' form remains unclear. Using electron cryotomography, here we show that Bacillus subtilis peptidoglycan is a uniformly dense layer with a textured surface. We further show it rips circumferentially, curls and thickens at free edges, and extends longitudinally when denatured. Molecular dynamics simulations show that only atomic models based on the circumferential topology recapitulate the observed curling and thickening, in support of an 'inside-to-outside' assembly process. We conclude that instead of being perpendicular to the cell surface or wrapped in coiled cables (two alternative models), the glycan strands in Gram-positive cell walls run circumferentially around the cell just as they do in Gram-negative cells. Together with providing insights into the architecture of the ultimate determinant of cell shape, this study is important because Gram-positive peptidoglycan is an antibiotic target crucial to the viability of several important rod-shaped pathogens including Bacillus anthracis, Listeria monocytogenes, and Clostridium difficile.

Indexed as

Bacillus subtilisCell WallCryoelectron MicroscopyElectron Microscope TomographyMacromolecular SubstancesModels, MolecularMolecular Dynamics SimulationPeptidoglycanMacromolecular SubstancesPeptidoglycan

Identifiers

PMID23600697
PMCPMC3663049
OpenAlexW2143132616

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.