Evidence map›Paper›PMID 23596518›Full record

ArticlePloS one2013

Restoration of mismatch repair functions in human cell line Nalm-6, which has high efficiency for gene targeting.

Tetsuya Suzuki, Akiko Ukai, Masamitsu Honma, Noritaka Adachi, Takehiko Nohmi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Homology-arm length of donor DNA affects the impact of Msh2 loss on homologous recombination-mediated gene targeting.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  6. DNA polymerase kappa protects human cells against MMC-induced genotoxicity through error-free translesion DNA synthesis.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tetsuya SuzukiDivision of Genetics and Mutagenesis, National Institute of Health Sciences, Setagaya-ku, Tokyo, Japan.
Akiko Ukai
Masamitsu Honma
Noritaka Adachi
Takehiko Nohmi
National Institute of Health Sciences · JPYokohama City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene targeting is a powerful approach in reverse genetics. The approach has been hampered in most of human cell lines, however, by the poor targeting efficiency. Nalm-6, a human pre-B acute lymphoblastic leukemia cell line, exhibits exceptionally high gene targeting efficiency and is used in DNA repair and the related research fields. Nonetheless, usage of the cell line is still limited partly because it lacks expression of MSH2, a component of mismatch repair complex, which leads to increased genome instability. Here, we report successful restoration of MSH2 expression in Nalm-6 cells and demonstrate that the recovery does not affect the high targeting efficiency. We recovered the expression by introduction of cDNA sequences corresponding to exons 9 to 16 at downstream of exon 8 of the MSH2 gene. Endogenous exons 9 to 16 were deleted in the cell line. The MSH2 expression substantially reduced spontaneous HPRT mutation frequency. Moreover, gene targeting efficiency in the MSH2-expressing cells was similar to that in the MSH2-lacking cells. In fact, we generated heterozygously REV3L knockout and the catalytically dead mutants in the MSH2-proficient Nalm-6 cells with efficiency of 20-30%. The established cell line, Nalm-6-MSH+, is useful for reverse genetics in human cells.

Indexed as

DNA Mismatch RepairGene TargetingBase SequenceCell LineComparative Genomic HybridizationDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA RepairExonsGene ExpressionGene Knockout TechniquesGene OrderGenetic LociGenome, HumanHumansHypoxanthine PhosphoribosyltransferaseDNA-Binding ProteinsDNA-Directed DNA PolymeraseHypoxanthine PhosphoribosyltransferaseMutS Homolog 2 ProteinREV3L protein, humanRNA, Messenger

Identifiers

PMID23596518
PMCPMC3626652
OpenAlexW2036894673

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.