Evidence map›Paper›PMID 23596309›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2013

Impaired autophagy, defective T cell homeostasis, and a wasting syndrome in mice with a T cell-specific deletion of Vps34.

Vrajesh V Parekh, Lan Wu, Kelli L Boyd, Janice A Williams, Jennifer A Gaddy, Danyvid Olivares-Villagómez, Timothy L Cover, Wei-Xing Zong, Jianhua Zhang, Luc Van Kaer

Open access · greenAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 158 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Proteostasis in T cell aging.Seminars in immunology · 2023
    Review

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Vrajesh V ParekhDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA. vrajesh.v.parekh@vanderbilt.edu
Lan Wu
Kelli L Boyd
Janice A Williams
Jennifer A Gaddy
Danyvid Olivares-Villagómez
Timothy L Cover
Wei-Xing Zong
Jianhua Zhang
Luc Van Kaer
Vanderbilt University · USBirmingham VA Medical Center · USStony Brook University · USVA Tennessee Valley Healthcare System · US

Funding

Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Protein and redox homeostasis in cancer development and therapyR01CA129536 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI ZONG, WEI-XING · 2008 to 2022
$4.8M
Mechanisms and consequences of iNKT cell anergyR01AI070305 · NIAID · VANDERBILT UNIVERSITY · PI VAN KAER, LUC · 2007 to 2011
$1.9M
Alpha-synuclein degradation mechanismsR01NS064090 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ZHANG, JIANHUA · 2010 to 2014
$1.6M
Modulation of chronic vascular inflammation by iNKT cellsR01HL089667 · NHLBI · VANDERBILT UNIVERSITY · PI VAN KAER, LUC · 2009 to 2012
$1.5M
Phosphatidylinositol 3-kinases and AutophagyR01GM097355 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI ZONG, WEI-XING · 2012 to 2015
$1.5M
Glycolipid-Reactive NKT Cells, Obesity and Insulin ResistanceR01DK081536 · NIDDK · VANDERBILT UNIVERSITY · PI VAN KAER, LUC, WU, LAN · 2010 to 2013
$1.3M
Modulation of EAE with ligand-activated NKT cellsR01NS044044 · NINDS · VANDERBILT UNIVERSITY · PI VAN KAER, LUC · 2002 to 2005
$1.3M
Metal-dependent regulation of the H. pylori Cag type IV secretion systemF32AI102568 · NIAID · VANDERBILT UNIVERSITY · PI GADDY, JENNIFER A · 2012 to 2012
$48k
NCI NIH HHS CA129536NCI NIH HHS R01 CA129536NHLBI NIH HHS HL089667NHLBI NIH HHS R01 HL089667NIAID NIH HHS AI070305NIAID NIH HHS F32 AI102568NIAID NIH HHS R01 AI070305NIDDK NIH HHS DK081536NIDDK NIH HHS P30 DK058404NIDDK NIH HHS P30DK058404NIDDK NIH HHS R01 DK081536NIGMS NIH HHS GM97355NIGMS NIH HHS R01 GM097355NINDS NIH HHS NS064090NINDS NIH HHS R01 NS044044NINDS NIH HHS R01 NS064090
6 · The paper itself

Abstract

Autophagy plays a critical role in multiple aspects of the immune system, including the development and function of T lymphocytes. In mammalian cells, the class III PI3K vacuolar protein sorting (Vps)34 is thought to play a critical role in autophagy. However, recent studies have cast doubt on the role of Vps34 in autophagy, at least in certain cell types. To study the effects of Vps34 on autophagy in T lymphocytes, we generated mice that selectively lack Vps34 in the T cell lineage. Vps34 ablation in T cells caused profound defects in autophagic flux, resulting in accumulation of cellular organelles and apoptosis. These animals exhibited normal intrathymic development of conventional T cells, but they were profoundly impaired in the intrathymic development of invariant NKT cells. In peripheral organs, T cell-specific ablation of Vps34 had a profound impact on T cell homeostasis and function. Furthermore, aged animals developed an inflammatory wasting syndrome characterized by weight loss, intestinal inflammation, and anemia. Consistent with this phenotype, Vps34 was required for the peripheral maintenance and function of CD4(+)Foxp3(+) regulatory T cells. Collectively, our study reveals a critical role for Vps34 in autophagy and for the peripheral homeostasis and function of T lymphocytes.

Indexed as

Adoptive TransferAgingAnimalsApoptosisAutophagyClass III Phosphatidylinositol 3-KinasesColitisForkhead Transcription FactorsInflammationInterleukin-2MiceMice, KnockoutNatural Killer T-CellsT-Lymphocytes, RegulatoryWasting SyndromeClass III Phosphatidylinositol 3-KinasesForkhead Transcription FactorsFoxp3 protein, mouseInterleukin-2

Identifiers

PMID23596309
PMCPMC3646937
OpenAlexW2136808380

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.