Evidence map›Paper›PMID 23596270›Full record

ArticleThe Journal of general virology2013

The papain-like protease of porcine epidemic diarrhea virus negatively regulates type I interferon pathway by acting as a viral deubiquitinase.

Yaling Xing, Jianfei Chen, Jian Tu, Bailing Zhang, Xiaojuan Chen, Hongyan Shi, Susan C Baker, Li Feng, Zhongbin Chen

Abstract read
In one paragraph

Article in The Journal of general virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 120 papers.

0numbers the graph read from it
0cells of the map it votes in
120citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

120 citing papers in PubMed, 179 citations in OpenAlex.

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  15. Review
  16. Expression and immunogenicity of non-structural protein 8 of porcine epidemic diarrhea virus.Veterinary research forum : an international quarterly journal · 2024
    Article
  17. Deubiquitylating Enzymes in Cancer and Immunity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Review
  18. Review
  19. Significance of the cGAS-STING Pathway in Health and Disease.International journal of molecular sciences · 2023
    Review
  20. The Many Ways to Deal with STING.International journal of molecular sciences · 2023
    Review

60 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Yaling XingBeijing Institute of Radiation Medicine, Beijing 100850, China.
Jianfei ChenHarbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, 427 Maduan Street, Harbin 150001, China.
Jian TuAustralian School of Advanced Medicine, Macquarie University, Sydney, NSW 2109, Australia.
Bailing ZhangBeijing Institute of Radiation Medicine, Beijing 100850, China.
Xiaojuan ChenBeijing Institute of Radiation Medicine, Beijing 100850, China.
Hongyan ShiHarbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, 427 Maduan Street, Harbin 150001, China.
Susan C BakerDepartment of Microbiology and Immunology, Loyola University of Chicago Stritch School of Medicine, Maywood, Illinois, USA.
Li FengHarbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, 427 Maduan Street, Harbin 150001, China.
Zhongbin ChenBeijing Institute of Radiation Medicine, Beijing 100850, China.
Beijing Radiation Center · CNHarbin Veterinary Research Institute · CNLoyola University Chicago · USMacquarie University · AU

Funding

Mechanisms of viral proteases in coronavirus replication and pathogenesisR01AI085089 · NIAID · LOYOLA UNIVERSITY CHICAGO · PI BAKER, SUSAN C., MESECAR, ANDREW D · 2010 to 2019
$6.8M
NIAID NIH HHS R01 AI085089
6 · The paper itself

Abstract

Porcine epidemic diarrhea virus (PEDV) is the cause of an economically important swine disease. Previous studies suggested that PEDV does not elicit a robust IFN response, but the mechanism(s) used to evade or block this innate immune response was not known. In this study, we found that PEDV infection blocked synthetic dsRNA-induced IFN-β production by interfering with the activation of interferon regulatory factor 3 (IRF3). We identified PEDV replicase encoded papain-like protease 2 (PLP2) as an IFN antagonist that depends on catalytic activity for its function. We show that levels of ubiquitinated proteins are reduced during PEDV infection and that PEDV PLP2 has deubiquitinase (DUB) activity that recognizes and processes both K-48 and K-63 linked polyubiquitin chains. Furthermore, we found that PEDV PLP2 strongly inhibits RIG-I- and STING-activated IFN expression and that PEDV PLP2 can be co-immunoprecipitated with and deubiquitinates RIG-I and STING, the key components of the signalling pathway for IFN expression. These results show that PEDV infection suppresses production of IFN-β and provides evidence indicating that the PEDV papain-like protease 2 acts as a viral DUB to interfere with the RIG-I- and STING-mediated signalling pathway.

Indexed as

Gene Expression RegulationAnimalsChlorocebus aethiopsCoronavirus Papain-Like ProteasesEndopeptidasesHEK293 CellsHumansImmunity, InnateInterferon-betaInterferon Type IPapainPorcine epidemic diarrhea virusSignal TransductionSwineUbiquitinVero CellsCoronavirus Papain-Like ProteasesEndopeptidasesInterferon-betaInterferon Type IPapainUbiquitin

Identifiers

PMID23596270
PMCPMC4811637
OpenAlexW2033513617

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.