Evidence map›Paper›PMID 23593462›Full record

ArticlePloS one2013

Structure-function-immunogenicity studies of PfEMP1 domain DBL2βPF11_0521, a malaria parasite ligand for ICAM-1.

Justin Gullingsrud, Tracy Saveria, Emily Amos, Patrick E Duffy, Andrew V Oleinikov

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Structural insights into diverse modes of ICAM-1 binding byProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  4. Review
  5. Article
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  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Justin GullingsrudSeattle Biomedical Research Institute, Seattle, Washington, USA.
Tracy Saveria
Emily Amos
Patrick E Duffy
Andrew V Oleinikov
Center for Infectious Disease Research · USUniversity of Washington · US

Funding

Identification of vaccine candidates against severe malariaR01AI092120 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI OLEINIKOV, ANDREW V · 2011 to 2014
$1.6M
High Throughput Analysis of Malarial Surface AntigensR21AI064503 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI OLEINIKOV, ANDREW V · 2007 to 2008
$503k
High throughput screening for anti-adhesion drugs to treat severe malariaR56AI083668 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI OLEINIKOV, ANDREW V · 2010 to 2010
$433k
NIAID NIH HHS 1R01AI092120NIAID NIH HHS 1R21AI064503NIAID NIH HHS 1R56AI083668NIAID NIH HHS R01 AI092120NIAID NIH HHS R21 AI064503NIAID NIH HHS R56 AI083668
6 · The paper itself

Abstract

Plasmodium falciparum virulence has been ascribed to its ability to sequester in deep vascular beds, mediated by the variant surface antigen family PfEMP1 binding endothelial receptors like ICAM-1. We previously observed that naturally-acquired antibodies that block a PfEMP1 domain, DBL2β of PF11_0521 allele, from binding to the human ICAM1 receptor, reduce the risk of malaria hospitalization in children. Here, we find that DBL2βPF11_0521 binds ICAM-1 in the low nM range and relate the structure of this domain with its function and immunogenicity. We demonstrate that the interaction with ICAM-1 is not impaired by point mutations in the N-terminal subdomain or in the flexible Loop 4 of DBL2βPF11_0521, although both substructures were previously implicated in binding ICAM-1. These data will help to refine the existing model of DBLβ::ICAM-1 interactions. Antibodies raised against full-length DBL2βPF11_0521, but not truncated forms lacking the N terminal fragment, block its interaction with ICAM-1. Our data suggest that full length domain is optimal for displaying functional epitopes and has a broad surface of interaction with ICAM-1 that is not disrupted by individual amino acid substitutions at putative key residues. This information might be important for the future design of anti-malarial vaccines based on PfEMP1 antigens.

Indexed as

AnimalsAntibodies, ProtozoanChlorocebus aethiopsCOS CellsEscherichia coliHumansImmobilized ProteinsIntercellular Adhesion Molecule-1LigandsMalaria, FalciparumMiceMutant ProteinsParasitesPlasmodium falciparumProtein BindingProtein Structure, TertiaryAntibodies, ProtozoanImmobilized ProteinsIntercellular Adhesion Molecule-1LigandsMutant ProteinsProtozoan Proteins

Identifiers

PMID23593462
PMCPMC3625211
OpenAlexW2002083017

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.