Evidence map›Paper›PMID 23593440›Full record

ArticlePloS one2013

Historical introgression of the downy mildew resistance gene Rpv12 from the Asian species Vitis amurensis into grapevine varieties.

Silvia Venuti, Dario Copetti, Serena Foria, Luigi Falginella, Sarolta Hoffmann, Diana Bellin, Petar Cindrić, Pál Kozma, Simone Scalabrin, Michele Morgante and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
8.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 155 citations in OpenAlex.

  1. A novel resistance locus from an unexploited East Asian Vitis coignetiae confers resistance to grapevine downy mildew.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  6. Plants (Basel, Switzerland) · 2024
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  12. Basic leucine zipper geneHorticulture research · 2023
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  14. HybridPlants (Basel, Switzerland) · 2023
    Article
  15. Discovery and genome-guided mapping ofHorticulture research · 2023
    Article
  16. Phased grapevine genome sequence of anFrontiers in plant science · 2023
    Article
  17. Article
  18. Review
  19. Review
  20. Frontiers in microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Silvia VenutiDipartimento di Scienze Agrarie e Ambientali, University of Udine, Udine, Italy.
Dario Copetti
Serena Foria
Luigi Falginella
Sarolta Hoffmann
Diana Bellin
Petar Cindrić
Pál Kozma
Simone Scalabrin
Michele Morgante
Raffaele Testolin
Gabriele Di Gaspero
University of Udine · ITIstituto di Genomica Applicata · ITDanieli (Italy) · ITUniversity of Pecs · HUUniversity of Novi Sad · RS

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Amur grape (Vitis amurensis Rupr.) thrives naturally in cool climates of Northeast Asia. Resistance against the introduced pathogen Plasmopara viticola is common among wild ecotypes that were propagated from Manchuria into Chinese vineyards or collected by Soviet botanists in Siberia, and used for the introgression of resistance into wine grapes (Vitis vinifera L.). A QTL analysis revealed a dominant gene Rpv12 that explained 79% of the phenotypic variance for downy mildew resistance and was inherited independently of other resistance genes. A Mendelian component of resistance-a hypersensitive response in leaves challenged with P. viticola-was mapped in an interval of 0.2 cM containing an array of coiled-coil NB-LRR genes on chromosome 14. We sequenced 10-kb genic regions in the Rpv12(+) haplotype and identified polymorphisms in 12 varieties of V. vinifera using next-generation sequencing. The combination of two SNPs in single-copy genes flanking the NB-LRR cluster distinguished the resistant haplotype from all others found in 200 accessions of V. vinifera, V. amurensis, and V. amurensis x V. vinifera crosses. The Rpv12(+) haplotype is shared by 15 varieties, the most ancestral of which are the century-old 'Zarja severa' and 'Michurinets'. Before this knowledge, the chromosome segment around Rpv12(+) became introgressed, shortened, and pyramided with another downy mildew resistance gene from North American grapevines (Rpv3) only by phenotypic selection. Rpv12(+) has an additive effect with Rpv3(+) to protect vines against natural infections, and confers foliar resistance to strains that are virulent on Rpv3(+) plants.

Indexed as

InbreedingAsiaBase SequenceChromosomes, PlantDisease ResistanceGenes, PlantGenetic LinkageHaplotypesHost-Pathogen InteractionsOomycetesPhenotypePhysical Chromosome MappingPlant DiseasesPlant ProteinsQuantitative Trait LociVitisPlant Proteins

Identifiers

PMID23593440
PMCPMC3625174
OpenAlexW2163589128

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.