Evidence map›Paper›PMID 23593153›Full record

ArticlePloS one2013

Novel loci associated with increased risk of sudden cardiac death in the context of coronary artery disease.

Adriana Huertas-Vazquez, Christopher P Nelson, Xiuqing Guo, Kyndaron Reinier, Audrey Uy-Evanado, Carmen Teodorescu, Jo Ayala, Katherine Jerger, Harpriya Chugh, WTCCC+ and 14 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Human Y Chromosome Exerts Pleiotropic Effects on Susceptibility to Atherosclerosis.Arteriosclerosis, thrombosis, and vascular biology · 2019
    Article
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  11. Review
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  14. Cumulative effects of common genetic variants on risk of sudden cardiac death.International journal of cardiology. Heart & vasculature · 2015
    Article
  15. Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 8 institutions in 2 countries.

Adriana Huertas-VazquezThe Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California, United States of America.
Christopher P Nelson
Xiuqing Guo
Kyndaron Reinier
Audrey Uy-Evanado
Carmen Teodorescu
Jo Ayala
Katherine Jerger
Harpriya Chugh
WTCCC+
Peter S Braund
Panos Deloukas
Alistair S Hall
Anthony J Balmforth
Michelle Jones
Kent D Taylor
Sara L Pulit
Christopher Newton-Cheh
Karen Gunson
Jonathan Jui
Jerome I Rotter
Christine M Albert
Nilesh J Samani
Sumeet S Chugh
Cedars-Sinai Medical Center · USMassachusetts General Hospital · USOregon Health & Science University · USUniversity of Leeds · GBUniversity of Leicester · GBHarvard University · USNIHR Leicester Cardiovascular Biomedical Research Unit · GBWellcome Sanger Institute · GB

Funding

UCLA Clinical and Translational Science InstituteUL1TR000124 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2012 to 2015
$57.0M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PETER J TONTONOZ · 2003 to 2026
$40.4M
PRE-DETERMINE: Biologic Markers and MRI SCD Cohort StudyR01HL091069 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI ALBERT, CHRISTINE M · 2008 to 2020
$12.9M
British Heart FoundationChief Scientist Office CZB/4/540Chief Scientist Office ETM/137Chief Scientist Office ETM/75Medical Research Council G0600329Medical Research Council G0800675Medical Research Council G0800759NCATS NIH HHS UL1 TR000124NHLBI NIH HHS R01 HL091069NIDDK NIH HHS P30 DK063491Wellcome Trust 090532
6 · The paper itself

Abstract

backgroundRecent genome-wide association studies (GWAS) have identified novel loci associated with sudden cardiac death (SCD). Despite this progress, identified DNA variants account for a relatively small portion of overall SCD risk, suggesting that additional loci contributing to SCD susceptibility await discovery. The objective of this study was to identify novel DNA variation associated with SCD in the context of coronary artery disease (CAD). METHODS AND

findingsUsing the MetaboChip custom array we conducted a case-control association analysis of 119,117 SNPs in 948 SCD cases (with underlying CAD) from the Oregon Sudden Unexpected Death Study (Oregon-SUDS) and 3,050 controls with CAD from the Wellcome Trust Case-Control Consortium (WTCCC). Two newly identified loci were significantly associated with increased risk of SCD after correction for multiple comparisons at: rs6730157 in the RAB3GAP1 gene on chromosome 2 (P = 4.93×10(-12), OR = 1.60) and rs2077316 in the ZNF365 gene on chromosome 10 (P = 3.64×10(-8), OR = 2.41).

conclusionsOur findings suggest that RAB3GAP1 and ZNF365 are relevant candidate genes for SCD and will contribute to the mechanistic understanding of SCD susceptibility.

Indexed as

Genetic LociGenetic Predisposition to DiseaseAdultAgedCase-Control StudiesCoronary Artery DiseaseDeath, Sudden, CardiacDNA-Binding ProteinsFemaleHumansIntronsMaleMiddle AgedPolymorphism, Single Nucleotiderab3 GTP-Binding ProteinsRiskDNA-Binding ProteinsRAB3GAP1 protein, humanrab3 GTP-Binding ProteinsTranscription FactorsZNF365 protein, human

Identifiers

PMID23593153
PMCPMC3617189
OpenAlexW2169804223

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.