Evidence map›Paper›PMID 23592994›Full record

ArticlePLoS pathogens2013

ATM and ATR activities maintain replication fork integrity during SV40 chromatin replication.

Gregory A Sowd, Nancy Yan Li, Ellen Fanning

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 63 citations in OpenAlex.

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  13. Journal of virology · 2021
    Article
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  20. Targeting DNA Damage Response as a Strategy to Treat HPV Infections.International journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Gregory A SowdDepartment of Biological Sciences, Vanderbilt University, Vanderbilt Ingram Comprehensive Cancer Center, Nashville, Tennessee, United States of America.
Nancy Yan Li
Ellen Fanning
Vanderbilt University · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI STACIE B DUSETZINA · 1995 to 2026
$172.8M
CONTROL OF SIMIAN VIRUS 40 AND CELLULAR DNA REPLICATIONR01GM052948 · NIGMS · VANDERBILT UNIVERSITY · PI FRIEDMAN, KATHERINE LOUISE · 1995 to 2013
$6.1M
Virology Training ProgramT32AI089554 · NIAID · VANDERBILT UNIVERSITY · PI CROWE, JAMES E · 2010 to 2014
$816k
NCI NIH HHS P30 CA068485NIAID NIH HHS T32 AI089554NIGMS NIH HHS GM52948NIGMS NIH HHS R01 GM052948
6 · The paper itself

Abstract

Mutation of DNA damage checkpoint signaling kinases ataxia telangiectasia-mutated (ATM) or ATM- and Rad3-related (ATR) results in genomic instability disorders. However, it is not well understood how the instability observed in these syndromes relates to DNA replication/repair defects and failed checkpoint control of cell cycling. As a simple model to address this question, we have studied SV40 chromatin replication in infected cells in the presence of inhibitors of ATM and ATR activities. Two-dimensional gel electrophoresis and southern blotting of SV40 chromatin replication products reveal that ATM activity prevents accumulation of unidirectional replication products, implying that ATM promotes repair of replication-associated double strand breaks. ATR activity alleviates breakage of a functional fork as it converges with a stalled fork. The results suggest that during SV40 chromatin replication, endogenous replication stress activates ATM and ATR signaling, orchestrating the assembly of genome maintenance machinery on viral replication intermediates.

Indexed as

DNA ReplicationAnimalsAtaxia Telangiectasia Mutated ProteinsCaffeineCell Cycle CheckpointsCell LineChlorocebus aethiopsChromatinDNA DamageDNA RepairHumansMorpholinesPhosphodiesterase InhibitorsPyronesSimian virus 40Virus Replication2-morpholin-4-yl-6-thianthren-1-yl-pyran-4-oneAtaxia Telangiectasia Mutated ProteinsATR protein, humanCaffeineChromatinMorpholinesPhosphodiesterase InhibitorsPyrones

Identifiers

PMID23592994
PMCPMC3617017
OpenAlexW2063579723

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.