Evidence map›Paper›PMID 23592335›Full record

ArticleHuman mutation2013

Synonymous mutations in RNASEH2A create cryptic splice sites impairing RNase H2 enzyme function in Aicardi-Goutières syndrome.

Gillian I Rice, Martin A M Reijns, Stephanie R Coffin, Gabriella M A Forte, Beverley H Anderson, Marcin Szynkiewicz, Hannah Gornall, David Gent, Andrea Leitch, Maria P Botella and 9 more

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

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  12. Nucleic Acid-Sensing Receptors: Rheostats of Autoimmunity and Autoinflammation.Journal of immunology (Baltimore, Md. : 1950) · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 13 institutions in 6 countries.

Gillian I RiceGenetic Medicine, Institute of Human Development, Faculty of Medical and Human Sciences, University of Manchester, United Kingdom.
Martin A M Reijns
Stephanie R Coffin
Gabriella M A Forte
Beverley H Anderson
Marcin Szynkiewicz
Hannah Gornall
David Gent
Andrea Leitch
Maria P Botella
Elisa Fazzi
Blanca Gener
Lieven Lagae
Ivana Olivieri
Simona Orcesi
Kathryn J Swoboda
Fred W Perrino
Andrew P Jackson
Yanick J Crow
Institute of Human Genetics · PLFondazione Istituto Neurologico Nazionale Casimiro Mondino · ITInstitute of Genetics and Cancer · GBManchester Academic Health Science Centre · GBWake Forest University · USHospital de Cruces · ESHospital Universitario Araba · ESSt. Mary's Hospital · GBUniversitair Ziekenhuis Leuven · BEUniversity of Brescia · ITUniversity of Edinburgh · GBUniversity of Manchester · GBUniversity of Utah · US

Funding

Mechanisms of the 3'-5' deoxyribonucleasesR01GM069962 · NIGMS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI PERRINO, FRED W · 2004 to 2012
$2.9M
Dominant TREX1 alleles in autoimmune diseaseF32GM095290 · NIGMS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI COFFIN, STEPHANIE · 2010 to 2011
$73k
Medical Research Council MC_PC_U127580972Medical Research Council MR/K501062/1NIGMS NIH HHS F32 GM095290NIGMS NIH HHS GM069962NIGMS NIH HHS R01 GM069962
6 · The paper itself

Abstract

Aicardi-Goutières syndrome is an inflammatory disorder resulting from mutations in TREX1, RNASEH2A/2B/2C, SAMHD1, or ADAR1. Here, we provide molecular, biochemical, and cellular evidence for the pathogenicity of two synonymous variants in RNASEH2A. Firstly, the c.69G>A (p.Val23Val) mutation causes the formation of a splice donor site within exon 1, resulting in an out of frame deletion at the end of exon 1, leading to reduced RNase H2 protein levels. The second mutation, c.75C>T (p.Arg25Arg), also introduces a splice donor site within exon 1, and the internal deletion of 18 amino acids. The truncated protein still forms a heterotrimeric RNase H2 complex, but lacks catalytic activity. However, as a likely result of leaky splicing, a small amount of full-length active protein is apparently produced in an individual homozygous for this mutation. Recognition of the disease causing status of these variants allows for diagnostic testing in relevant families.

Indexed as

Point MutationRNA Splice SitesAutoimmune Diseases of the Nervous SystemFemaleGenetic VariationHumansInfantInfant, NewbornMaleMutation, MissenseNervous System MalformationsRibonuclease HRibonuclease Hribonuclease HIIRNA Splice SitesAGSAicardi-Goutières syndromeRNASEH2Asplicingsynonymous mutations

Identifiers

PMID23592335
PMCPMC3714325
OpenAlexW2026462693

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.