Evidence map›Paper›PMID 23592050›Full record

ReviewImmunologic research2013

Tracing environmental markers of autoimmunity: introducing the infectome.

Dimitrios P Bogdanos, Daniel S Smyk, Pietro Invernizzi, Eirini I Rigopoulou, Miri Blank, Lazaros Sakkas, Shideh Pouria, Yehuda Shoenfeld

Abstract readReview
In one paragraph

Review in Immunologic research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. New insights into pathogenesis of IgA nephropathy.International urology and nephrology · 2022
    Review
  5. Article
  6. Review
  7. Mediterranean journal of rheumatology · 2018
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Vaccines, adjuvants and autoimmunity.Pharmacological research · 2015
    Review
  14. Review
  15. Review
  16. Rheumatic diseases and the microbiome.International journal of rheumatic diseases · 2014
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Dimitrios P BogdanosDivision of Transplantation Immunology and Mucosal Biology, Institute of Liver Studies, King's College London School of Medicine at King's College Hospital, Denmark Hill Campus, London, SE5 9RS, UK. dimitrios.bogdanos@kcl.ac.uk
Daniel S Smyk
Pietro Invernizzi
Eirini I Rigopoulou
Miri Blank
Lazaros Sakkas
Shideh Pouria
Yehuda Shoenfeld

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We recently introduced the concept of the infectome as a means of studying all infectious factors which contribute to the development of autoimmune disease. It forms the infectious part of the exposome, which collates all environmental factors contributing to the development of disease and studies the sum total of burden which leads to the loss of adaptive mechanisms in the body. These studies complement genome-wide association studies, which establish the genetic predisposition to disease. The infectome is a component which spans the whole life and may begin at the earliest stages right up to the time when the first symptoms manifest, and may thus contribute to the understanding of the pathogenesis of autoimmunity at the prodromal/asymptomatic stages. We provide practical examples and research tools as to how we can investigate disease-specific infectomes, using laboratory approaches employed from projects studying the "immunome" and "microbiome". It is envisioned that an understanding of the infectome and the environmental factors that affect it will allow for earlier patient-specific intervention by clinicians, through the possible treatment of infectious agents as well as other compounding factors, and hence slowing or preventing disease development.

Indexed as

Environmental ExposureAnimalsAutoimmune DiseasesBiomarkersGene-Environment InteractionGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansImmunologic TestsInfectionsLupus Erythematosus, SystemicMass ScreeningMicrobiotaBiomarkers

Identifiers

PMID23592050
PMCPMC7091283

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.