Evidence map›Paper›PMID 23590631›Full record

ArticleBiochemistry2013

Comparative proteomic analysis identifies age-dependent increases in the abundance of specific proteins after deletion of the small heat shock proteins αA- and αB-crystallin.

Usha P Andley, James P Malone, Paul D Hamilton, Nathan Ravi, R Reid Townsend

Open access · greenAbstract readComparative Study
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  4. Review
  5. Biochemistry and biophysics reports · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Usha P AndleyDepartment of Ophthalmology and Visual Sciences, Washington University, School of Medicine, St. Louis, MO 63110, USA. andley@vision.wustl.edu
James P Malone
Paul D Hamilton
Nathan Ravi
R Reid Townsend
United States Department of Veterans Affairs · USWashington University in St. Louis · US

Funding

Washington University Institute of Clinical and Translational SciencesUL1TR000448 · NCATS · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2012 to 2016
$41.4M
WASHINGTON UNIVERSITY CENTER VISION RESEARCHP30EY002687 · NEI · WASHINGTON UNIVERSITY · PI Philip Andrew Ruzycki · 1985 to 2026
$18.4M
YOGA LIFESTYLE INTERVENTION REDUCES BLOOD PRESSURE IN HIV-INFECTED ADULTSP41RR000954 · NCRR · WASHINGTON UNIVERSITY · PI GROSS, MICHAEL L · 1985 to 2011
$16.0M
TrainingP41GM103422 · NIGMS · WASHINGTON UNIVERSITY · PI YARASHESKI, KEVIN E · 2012 to 2019
$12.0M
ROLE OF OXYGEN IN OCULAR PATHOLOGYR01EY005681 · NEI · WASHINGTON UNIVERSITY · PI ANDLEY, USHA P · 1985 to 2018
$7.3M
NCATS NIH HHS UL1 TR000448NCRR NIH HHS 5P41RR000954-35NCRR NIH HHS P41 RR000954NEI NIH HHS EY02687NEI NIH HHS P30 EY002687NEI NIH HHS R01 EY005681NEI NIH HHS R01EY05681NIGMS NIH HHS 8 P41 GM103422-35NIGMS NIH HHS P41 GM103422
6 · The paper itself

Abstract

Mice with deletion of genes for small heat shock proteins αA- and αB-crystallin (αA/αB(-/-)) develop cataracts. We used proteomic analysis to identify lens proteins that change in abundance after deletion of these α-crystallin genes. Wild-type (WT) and αA/αB(-/-) knockout (DKO) mice were compared using two-dimensional difference gel electrophoresis and mass spectrometric analysis, and protein identifications were validated by Mascot proteomic software. The abundance of histones H2A, H4, and H2B fragment, and a low molecular weight β1-catenin increased 2-3-fold in postnatal day 2 lenses of DKO lenses compared with WT lenses. Additional major increases were observed in abundance of βB2-crystallin and vimentin in 30-day-old lenses of DKO animals compared with WT animals. Lenses of DKO mice were comprised of nine protein spots containing βB2-crystallin at 10-40-fold higher abundance and three protein spots containing vimentin at ≥2-fold higher abundance than in WT lenses. Gel permeation chromatography identified a unique 328 kDa protein in DKO lenses, containing β-crystallin, demonstrating aggregation of β-crystallin in the absence of α-crystallins. Together, these changes provide biochemical evidence for possible functions of specific cell adhesion proteins, cytoskeletal proteins, and crystallins in lens opacities caused by the absence of the major chaperones, αA- and αB-crystallins.

Indexed as

ProteomicsAge FactorsAnimalsbeta CateninBlotting, WesternChromatography, GelChromatography, High Pressure LiquidCrystallinsElectrophoresis, Gel, Two-DimensionalHeat-Shock ProteinsHistonesMass SpectrometryMiceMice, KnockoutReverse Transcriptase Polymerase Chain ReactionVimentinbeta CateninCrystallinsHeat-Shock ProteinsHistonesVimentin

Identifiers

PMID23590631
PMCPMC3690595
OpenAlexW2313114134

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.