Evidence map›Paper›PMID 23589863›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Dosage compensation and inverse effects in triple X metafemales of Drosophila.

Lin Sun, Adam F Johnson, Ryan C Donohue, Jilong Li, Jianlin Cheng, James A Birchler

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed.

  1. Article
  2. Gene Dosage Sensitivity and Human Genetic Diseases.Journal of inherited metabolic disease · 2025
    Review
  3. Global modulation of gene expression and transcriptome size in aneuploid combinations of maize.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Exploring genome-transcriptome correlations in cancer.Biochemical Society transactions · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Aneuploidy effects on human gene expression across three cell types.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Dosage Compensation inInternational journal of molecular sciences · 2022
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. iScience · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lin SunDivision of Biological Sciences, Computer Science Department, and Informatics Institute, University of Missouri, Columbia, MO 65211, USA.
Adam F Johnson
Ryan C Donohue
Jilong Li
Jianlin Cheng
James A Birchler

Funding

Dosage Compensation in DrosophilaR01GM068042 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI BIRCHLER, JAMES A · 2003 to 2012
$2.0M
NIGMS NIH HHS R01 GM068042NIGMS NIH HHS R01GM068042
6 · The paper itself

Abstract

Dosage compensation, the equalized X chromosome gene expression between males and females in Drosophila, has also been found in triple X metafemales. Inverse dosage effects, produced by genomic imbalance, are believed to account for this modulated expression, but they have not been studied on a global level. Here, we show a global expression comparison of metafemales (XXX; AA) with normal females (XX; AA) with high-throughput RNA-sequencing. We found that the majority of the X-linked genes in metafemales exhibit dosage compensation with an expression level similar to that of normal diploid females. In parallel, most of the autosomal genes were expressed at about two-thirds the level of normal females, the ratio of inverse dosage effects produced by the extra X chromosome. Both compensation and inverse effects were further confirmed by combination of X-linked and autosomally located miniwhite reporter genes in metafemales and relative quantitative PCR of selected genes. These data provide evidence for an inverse dosage component to X chromosome compensation.

Indexed as

Dosage Compensation, GeneticAnimalsCrosses, GeneticDrosophila melanogasterFemaleGenes, ReporterMalePolymerase Chain ReactionReproducibility of ResultsSequence Analysis, RNAX Chromosome

Identifiers

PMID23589863
PMCPMC3645549

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.