Evidence map›Paper›PMID 23589306›Full record

ArticleThe Journal of biological chemistry2013

The cyclomodulin cycle inhibiting factor (CIF) alters cullin neddylation dynamics.

Tasha B Toro, Julia I Toth, Matthew D Petroski

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
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  4. Which bacterial toxins are worthy of validation as markers in colorectal cancer screening? A critical review.Biomedical papers of the Medical Faculty of the University Palacky, Olomouc, Czechoslovakia · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tasha B ToroSignal Transduction Program, NCI-designated Cancer Center, Sanford-Burnham Medical Research Institute, La Jolla, California 92037, USA.
Julia I Toth
Matthew D Petroski
Sanford Burnham Prebys Medical Discovery Institute · US

Funding

Trans-disciplinary Postdoctoral Training in Cancer BiologyT32CA121949 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI RONAI, ZEEV A. · 2007 to 2011
$1.8M
NCI NIH HHS 5 T32 CA121949NCI NIH HHS T32 CA121949
6 · The paper itself

Abstract

The bacterial effector protein cycle inhibiting factor (CIF) converts glutamine 40 of NEDD8 to glutamate (Q40E), causing cytopathic effects and inhibiting cell proliferation. Although these have been attributed to blocking the functions of cullin-RING ubiquitin ligases, how CIF modulates NEDD8-dependent signaling is unclear. Here we use conditional NEDD8-dependent yeast to explore the effects of CIF on cullin neddylation. Although CIF causes cullin deneddylation and the generation of free NEDD8 Q40E, inhibiting the COP9 signalosome (CSN) allows Q40E to form only on NEDD8 attached to cullins. In the presence of the CSN, NEDD8 Q40E is removed from cullins more rapidly than NEDD8, leading to a decrease in steady-state cullin neddylation. As NEDD8 Q40E is competent for cullin conjugation in the absence of functional CSN and with overexpression of the NEDD8 ligase Dcn1, our data are consistent with NEDD8 deamidation causing enhanced deneddylation of cullins by the CSN. This leads to a dramatic change in the extent of activated cullin-RING ubiquitin ligases.

Indexed as

Protein Processing, Post-TranslationalBacterial ProteinsCOP9 Signalosome ComplexCullin ProteinsGlutamic AcidGlutamineHumansMultiprotein ComplexesNEDD8 ProteinPeptide HydrolasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitin-Protein LigasesUbiquitinsBacterial ProteinsCOP9 Signalosome ComplexCullin ProteinsDcn1 protein, S cerevisiaeGlutamic AcidGlutamineMultiprotein ComplexesNEDD8 ProteinNEDD8 protein, humanPeptide HydrolasesSaccharomyces cerevisiae ProteinsUbiquitin-Protein LigasesUbiquitinsCIFCullin-RING Ubiquitin LigasesNEDD8Signal TransductionUbiquitinUbiquitinationUbiquitin LigaseUbiquitin-like ProteinsYeast

Identifiers

PMID23589306
PMCPMC3663497
OpenAlexW2034625176

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.