Evidence map›Paper›PMID 23588107›Full record

ArticleThe pharmacogenomics journal2014

Higher frequency of genetic variants conferring increased risk for ADRs for commonly used drugs treating cancer, AIDS and tuberculosis in persons of African descent.

F Aminkeng, C J D Ross, S R Rassekh, L R Brunham, J Sistonen, M-P Dube, M Ibrahim, T B Nyambo, S A Omar, A Froment and 5 more

Abstract read
In one paragraph

Article in The pharmacogenomics journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  3. 'Research ethics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

F AminkengDepartment of Medical Genetics, Centre for Molecular Medicine and Therapeutics, Child and Family Research Institute, University of British Columbia, Vancouver, British Columbia, Canada.
C J D RossDivision of Translational Therapeutics, Department of Pediatrics, University of British Columbia, Vancouver, British Columbia, Canada.
S R RassekhDivision of Pediatric Hematology/Oncology/BMT, Department of Pediatrics, University of British Columbia, Vancouver, British Columbia, Canada.
L R Brunham1] Department of Medical Genetics, Centre for Molecular Medicine and Therapeutics, Child and Family Research Institute, University of British Columbia, Vancouver, British Columbia, Canada [2] Translational Laboratory in Genetic Medicine, Department of Medicine, National University of Singapore and Association for Science, Technology and Research (A*STAR), Singapore.
J Sistonen1] Department of Medical Genetics, Centre for Molecular Medicine and Therapeutics, Child and Family Research Institute, University of British Columbia, Vancouver, British Columbia, Canada [2] Inselspital, Bern University Hospital and University of Bern, Bern, Switzerland.
M-P DubeMontreal Heart Institute Research Centre and Universite de Montreal, Montreal, Quebec, Canada.
M IbrahimDepartment of Molecular Biology, Institute of Endemic Diseases, University of Khartoum, Khartoum, Sudan.
T B NyamboDepartment of Biochemistry, Muhimbili University of Health and Allied Sciences, Dar es Salaam, Tanzania.
S A OmarKenya Medical Research Institute, Center for Biotechnology Research and Development, Nairobi, Kenya.
A FromentUMR 208, IRD-MNHN, Musée de l'Homme, Paris, France.
J-M BodoMinistère de la Recherche Scientifique et de l'Innovation, Yaoundé, Cameroon.
S TishkoffDepartments of Genetics and Biology, University of Pennsylvania, Philadelphia, PA, USA.
B C CarletonDivision of Translational Therapeutics, Department of Pediatrics, University of British Columbia, Vancouver, British Columbia, Canada.
M R Hayden1] Department of Medical Genetics, Centre for Molecular Medicine and Therapeutics, Child and Family Research Institute, University of British Columbia, Vancouver, British Columbia, Canada [2] Translational Laboratory in Genetic Medicine, Department of Medicine, National University of Singapore and Association for Science, Technology and Research (A*STAR), Singapore.
Canadian Pharmacogenomics Network for Drug Safety Consortium

Funding

African Odyssey: An Integrative Genomics Analysis of Complex Physiologic TraitsDP1ES022577 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI TISHKOFF, SARAH ANNE · 2012 to 2013
$1.6M
Variation at Malaria Resistance Genes in AfricansR01GM076637 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI TISHKOFF, SARAH ANNE · 2006 to 2009
$1.2M
CIHRNCCDPHP CDC HHS 8 DP1 ES022577-04NIEHS NIH HHS DP1 ES022577NIGMS NIH HHS R01 GM076637NIGMS NIH HHS R01GM076637
6 · The paper itself

Abstract

There is established clinical evidence for differences in drug response, cure rates and survival outcomes between different ethnic populations, but the causes are poorly understood. Differences in frequencies of functional genetic variants in key drug response and metabolism genes may significantly influence drug response differences in different populations. To assess this, we genotyped 1330 individuals of African (n=372) and European (n=958) descent for 4535 single-nucleotide polymorphisms in 350 key drug absorption, distribution, metabolism, elimination and toxicity genes. Important and remarkable differences in the distribution of genetic variants were observed between Africans and Europeans and among the African populations. These could translate into significant differences in drug efficacy and safety profiles, and also in the required dose to achieve the desired therapeutic effect in different populations. Our data points to the need for population-specific genetic variation in personalizing medicine and care.

Indexed as

Acquired Immunodeficiency SyndromeBlack PeopleDrug-Related Side Effects and Adverse ReactionsGene FrequencyGenetic Predisposition to DiseaseGenetic VariationHumansNeoplasmsPolymorphism, Single NucleotideTuberculosisWhite People

Identifiers

PMID23588107
PMCPMC4684079

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.