Evidence map›Paper›PMID 23585030›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2013

Databases in SenseLab for the genomics, proteomics, and function of olfactory receptors.

Luis N Marenco, Gautam Bahl, Lorra Hyland, Jing Shi, Rixin Wang, Peter C Lai, Perry L Miller, Gordon M Shepherd, Chiquito J Crasto

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Luis N MarencoCenter for Medical Informatics, Yale University School of Medicine, New Haven, CT, USA.
Gautam Bahl
Lorra Hyland
Jing Shi
Rixin Wang
Peter C Lai
Perry L Miller
Gordon M Shepherd
Chiquito J Crasto

Funding

SenseLab: Integration of Multidisciplinary Sensory DataR01DC009977 · NIDCD · YALE UNIVERSITY · PI HINES, MICHAEL L, MCDOUGAL, ROBERT A. · 2009 to 2018
$6.7M
Mediated Integration of Neuroscience ResourcesR01DA021253 · NIDA · YALE UNIVERSITY · PI MARENCO, LUIS N · 2006 to 2008
$970k
Exploring a predictive paradigm for olfactory receptor-odorant interactionsR21DC011068 · NIDCD · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CRASTO, CHIQUITO J · 2010 to 2011
$397k
NIDA NIH HHS R01 DA021253NIDA NIH HHS R01DA021253NIDCD NIH HHS R01 DC009977NIDCD NIH HHS R01DC009977NIDCD NIH HHS R21 DC011068NIDCD NIH HHS R21DC011068
6 · The paper itself

Abstract

We present here, the salient aspects of three databases: Olfactory Receptor Database (ORDB) is a repository of genomics and proteomics information of ORs; OdorDB stores information related to odorous compounds, specifically identifying those that have been shown to interact with olfactory rectors; and OdorModelDB disseminates information related to computational models of olfactory receptors (ORs). The data stored among these databases is integrated. Presented in this chapter are descriptions of these resources, which are part of the SenseLab suite of databases, a discussion of the computational infrastructure that enhances the efficacy of information storage, retrieval, dissemination, and automated data population from external sources.

Indexed as

Databases, ProteinAnimalsData MiningHumansProteomicsRatsReceptors, OdorantReceptors, Odorant

Identifiers

PMID23585030
PMCPMC4465568

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.