Evidence map›Paper›PMID 23584789›Full record

ArticleApplied and environmental microbiology2013

Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens.

Frank O Aylward, Kristin E Burnum-Johnson, Susannah G Tringe, Clotilde Teiling, Daniel M Tremmel, Joseph A Moeller, Jarrod J Scott, Kerrie W Barry, Paul D Piehowski, Carrie D Nicora and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 111 citations in OpenAlex.

  1. Article
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  12. The Volatile Organic Compounds ofMicroorganisms · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. The Symbiotic FungusInsects · 2022
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 2 countries.

Frank O AylwardDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI, USA.
Kristin E Burnum-Johnson
Susannah G Tringe
Clotilde Teiling
Daniel M Tremmel
Joseph A Moeller
Jarrod J Scott
Kerrie W Barry
Paul D Piehowski
Carrie D Nicora
Stephanie A Malfatti
Matthew E Monroe
Samuel O Purvine
Lynne A Goodwin
Richard D Smith
George M Weinstock
Nicole M Gerardo
Garret Suen
Mary S Lipton
Cameron R Currie
Pacific Northwest National Laboratory · USJoint Genome Institute · USUniversity of Wisconsin–Madison · USGreat Lakes Bioenergy Research Center · USEmory University · USRoche (United States) · USWashington University in St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants represent a large reservoir of organic carbon comprised primarily of recalcitrant polymers that most metazoans are unable to deconstruct. Many herbivores gain access to nutrients in this material indirectly by associating with microbial symbionts, and leaf-cutter ants are a paradigmatic example. These ants use fresh foliar biomass as manure to cultivate gardens composed primarily of Leucoagaricus gongylophorus, a basidiomycetous fungus that produces specialized hyphal swellings that serve as a food source for the host ant colony. Although leaf-cutter ants are conspicuous herbivores that contribute substantially to carbon turnover in Neotropical ecosystems, the process through which plant biomass is degraded in their fungus gardens is not well understood. Here we present the first draft genome of L. gongylophorus, and, using genomic and metaproteomic tools, we investigate its role in lignocellulose degradation in the gardens of both Atta cephalotes and Acromyrmex echinatior leaf-cutter ants. We show that L. gongylophorus produces a diversity of lignocellulases in ant gardens and is likely the primary driver of plant biomass degradation in these ecosystems. We also show that this fungus produces distinct sets of lignocellulases throughout the different stages of biomass degradation, including numerous cellulases and laccases that likely play an important role in lignocellulose degradation. Our study provides a detailed analysis of plant biomass degradation in leaf-cutter ant fungus gardens and insight into the enzymes underlying the symbiosis between these dominant herbivores and their obligate fungal cultivar.

Indexed as

AgaricalesAmino Acid SequenceAnimalsAntsBase SequenceCellulasesCluster AnalysisGenome, FungalHerbivoryLigninMolecular Sequence DataPanamaPhylogenyPlantsProteomicsSequence Analysis, DNACellulasesLigninlignocellulose

Identifiers

PMID23584789
PMCPMC3675943
OpenAlexW2122020823

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.