Evidence map›Paper›PMID 23583980›Full record

SynthesisNature genetics2013

Genome-wide association study identifies multiple susceptibility loci for pulmonary fibrosis.

Tasha E Fingerlin, Elissa Murphy, Weiming Zhang, Anna L Peljto, Kevin K Brown, Mark P Steele, James E Loyd, Gregory P Cosgrove, David Lynch, Steve Groshong and 40 more

Erratum issuedAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 493 papers, 12 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
493citing papers in PubMed, 12 pooled it
44.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

493 citing papers in PubMed, 12 syntheses or guidelines pooled it, 821 citations in OpenAlex.

  1. Pooled it
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  3. Common single nucleotide polymorphisms associated with idiopathic pulmonary fibrosis: a systematic review.European respiratory review : an official journal of the European Respiratory Society · 2024
    Pooled it
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  8. RMD open · 2022
    Pooled it
  9. Guideline
  10. Pooled it
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  13. Article
  14. Review
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  20. Review

433 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

50 authors at 15 institutions in 6 countries.

Tasha E FingerlinUniversity of Colorado Denver, School of Public Health, Denver, Colorado, USA.
Elissa Murphy
Weiming Zhang
Anna L Peljto
Kevin K Brown
Mark P Steele
James E Loyd
Gregory P Cosgrove
David Lynch
Steve Groshong
Harold R Collard
Paul J Wolters
Williamson Z Bradford
Karl Kossen
Scott D Seiwert
Roland M du Bois
Christine Kim Garcia
Megan S Devine
Gunnar Gudmundsson
Helgi J Isaksson
Naftali Kaminski
Yingze Zhang
Kevin F Gibson
Lisa H Lancaster
Joy D Cogan
Wendi R Mason
Toby M Maher
Philip L Molyneaux
Athol U Wells
Miriam F Moffatt
Moises Selman
Annie Pardo
Dong Soon Kim
James D Crapo
Barry J Make
Elizabeth A Regan
Dinesha S Walek
Jerry J Daniel
Yoichiro Kamatani
Diana Zelenika
Keith Smith
David McKean
Brent S Pedersen
Janet Talbert
Raven N Kidd
Cheryl R Markin
Kenneth B Beckman
Mark Lathrop
Marvin I Schwarz
David A Schwartz
University of Colorado Denver · USVanderbilt University · USImperial College London · GBUniversity of Minnesota · USUniversity of Pittsburgh · USFondation Jean Dausset-CEPH · FRNational Jewish Health · USThe University of Texas Southwestern Medical Center · USUniversity of California, San Francisco · USInstituto Nacional de Enfermedades Respiratorias · MXIQVIA (United States) · USNational University Hospital of Iceland · ISReykjavík University · ISUlsan College · KRUniversidad Nacional Autónoma de México · MX

Funding

Genetic Epidemiology of COPDU01HL089897 · NHLBI · NATIONAL JEWISH HEALTH · PI CRAPO, JAMES D · 2007 to 2021
$56.9M
Mechanisms of Familial Pulmonary FibrosisP01HL092870 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BLACKWELL, TIMOTHY S. · 2010 to 2020
$21.6M
Genetic Epidemiology of COPDU01HL089856 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2007 to 2021
$20.7M
Role of Genetics in Idiopathic Pulmonary Fibrosis (IPF)R01HL097163 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI FINGERLIN, TASHA E., SCHWARTZ, DAVID ALBERT · 2009 to 2018
$16.4M
Surrogate Biomarkers for Disease Progression in IPFP50HL084932 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI RAY, ANURADHA · 2006 to 2010
$12.2M
Lung Genomics Research ConsortiumRC2HL101715 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI GERACI, MARK W, KAMINSKI, NAFTALI · 2009 to 2010
$11.4M
Genomic Signatures for Idiopathic Interstitial PneumoniaR01HL095393 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI SCHWARTZ, DAVID ALBERT · 2008 to 2011
$3.3M
Gene networks beyond organ boundaries; heart, lung and pulmonary vascular diseaseU01HL108642 · NHLBI · YALE UNIVERSITY · PI AHMAD, FERHAAN, BENOS, PANAGIOTIS V · 2011 to 2014
$2.2M
Genetic and Epigenetic Changes in MUC5B and Fibrosing Interstitial Lung DiseaseI01BX001534 · VA · VA EASTERN COLORADO HEALTH CARE SYSTEM · PI SCHWARTZ, DAVID ALBERT · 2013 to 2016
–
BLRD VA I01 BX001534NHLBI NIH HHS P01 HL092870NHLBI NIH HHS P01-HL092870NHLBI NIH HHS P50 HL084932NHLBI NIH HHS P50-HL0894932NHLBI NIH HHS R01 HL095393NHLBI NIH HHS R01-HL095393NHLBI NIH HHS R01 HL097163NHLBI NIH HHS R01-HL097163NHLBI NIH HHS RC2 HL101715NHLBI NIH HHS RC2-HL101715NHLBI NIH HHS U01 HL089856NHLBI NIH HHS U01-HL089856NHLBI NIH HHS U01 HL089897NHLBI NIH HHS U01-HL089897NHLBI NIH HHS U01 HL108642NHLBI NIH HHS U01-HL108642Wellcome Trust 097117
6 · The paper itself

Abstract

We performed a genome-wide association study of non-Hispanic, white individuals with fibrotic idiopathic interstitial pneumonias (IIPs; n = 1,616) and controls (n = 4,683), with follow-up replication analyses in 876 cases and 1,890 controls. We confirmed association with TERT at 5p15, MUC5B at 11p15 and the 3q26 region near TERC, and we identified seven newly associated loci (Pmeta = 2.4 × 10(-8) to 1.1 × 10(-19)), including FAM13A (4q22), DSP (6p24), OBFC1 (10q24), ATP11A (13q34), DPP9 (19p13) and chromosomal regions 7q22 and 15q14-15. Our results suggest that genes involved in host defense, cell-cell adhesion and DNA repair contribute to risk of fibrotic IIPs.

Indexed as

Genetic LociCase-Control StudiesChromosomes, HumanGene ExpressionGene FrequencyGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansIdiopathic Pulmonary FibrosisLungPolymorphism, Single NucleotideSequence Analysis, DNA

Identifiers

PMID23583980
PMCPMC3677861
OpenAlexW2055245602

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.