Evidence map›Paper›PMID 23583629›Full record

ArticleBiochimica et biophysica acta2013

Inhibition of gingipains by their profragments as the mechanism protecting Porphyromonas gingivalis against premature activation of secreted proteases.

Florian Veillard, Maryta Sztukowska, Danuta Mizgalska, Mirosław Ksiazek, John Houston, Barbara Potempa, Jan J Enghild, Ida B Thogersen, F Xavier Gomis-Rüth, Ky-Anh Nguyen and 1 more

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 28 citations in OpenAlex.

  1. Gut microbes · 2026
    Article
  2. Molecules (Basel, Switzerland) · 2026
    Review
  3. Discovery of Gingipains andFoods (Basel, Switzerland) · 2025
    Review
  4. Article
  5. Article
  6. Advances in the type IX secretion system: an exploration focusing onCurrent research in microbial sciences · 2025
    Review
  7. Article
  8. Article
  9. Kgp DNA Vaccine Prevents Experimental Periodontitis.Oral health & preventive dentistry · 2021
    Article
  10. Article
  11. Article
  12. Development of a novel, high-affinity ssDNA trypsin inhibitor.Journal of enzyme inhibition and medicinal chemistry · 2019
    Article
  13. Article
  14. Maturation of the Mfa1 Fimbriae in the Oral PathogenFrontiers in cellular and infection microbiology · 2018
    Article
  15. Article
  16. Genes Contributing toFrontiers in cellular and infection microbiology · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 6 countries.

Florian VeillardUniversity of Louisville School of Dentistry, Louisville, KY 40202, USA. florian.veillard@gmail.com
Maryta Sztukowska
Danuta Mizgalska
Mirosław Ksiazek
John Houston
Barbara Potempa
Jan J Enghild
Ida B Thogersen
F Xavier Gomis-Rüth
Ky-Anh Nguyen
Jan Potempa
University of Louisville · USJagiellonian University · PLAarhus University · DKInstitut de Biologia Molecular de Barcelona · ESMillennium Institute · BR

Funding

BACTERIAL PROTEINASES IN PERIODONTAL DISEASER01DE009761 · NIDCR · UNIVERSITY OF LOUISVILLE · PI POTEMPA, JAN S · 1991 to 2012
$3.8M
Bacterial peptidylarginine deiminase, a link between gums and joint diseaseR01DE022597 · NIDCR · UNIVERSITY OF LOUISVILLE · PI POTEMPA, JAN S · 2013 to 2023
$3.7M
NIDCR NIH HHS R01 DE009761NIDCR NIH HHS R01 DE022597
6 · The paper itself

Abstract

backgroundArginine-specific (RgpB and RgpA) and lysine-specific (Kgp) gingipains are secretory cysteine proteinases of Porphyromonas gingivalis that act as important virulence factors for the organism. They are translated as zymogens with both N- and C-terminal extensions, which are proteolytically cleaved during secretion. In this report, we describe and characterize inhibition of the gingipains by their N-terminal prodomains to maintain latency during their export through the cellular compartments.

methodsRecombinant forms of various prodomains (PD) were analyzed for their interaction with mature gingipains. The kinetics of their inhibition of proteolytic activity along with the formation of stable inhibitory complexes with native gingipains was studied by gel filtration, native PAGE and substrate hydrolysis.

resultsPDRgpB and PDRgpA formed tight complexes with arginine-specific gingipains (Ki in the range from 6.2nM to 0.85nM). In contrast, PDKgp showed no inhibitory activity. A conserved Arg-102 residue in PDRgpB and PDRgpA was recognized as the P1 residue. Mutation of Arg-102 to Lys reduced inhibitory potency of PDRgpB by one order of magnitude while its substitutions with Ala, Gln or Gly totally abolished the PD inhibitory activity. Covalent modification of the catalytic cysteine with tosyl-l-Lys-chloromethylketone (TLCK) or H-D-Phe-Arg-chloromethylketone did not affect formation of the stable complex.

conclusionLatency of arginine-specific progingipains is efficiently exerted by N-terminal prodomains thus protecting the periplasm from potentially damaging effect of prematurely activated gingipains. GENERAL SIGNIFICANCE: Blocking progingipain activation may offer an attractive strategy to attenuate P. gingivalis pathogenicity.

Indexed as

Adhesins, BacterialCysteine EndopeptidasesCysteine Proteinase InhibitorsEnzyme ActivationGingipain Cysteine EndopeptidasesGlycosylationPeptide FragmentsPorphyromonas gingivalisProtein Structure, TertiaryRecombinant ProteinsAdhesins, BacterialCysteine EndopeptidasesCysteine Proteinase InhibitorsGingipain Cysteine EndopeptidasesPeptide FragmentsRecombinant Proteins

Identifiers

PMID23583629
PMCPMC3773880
OpenAlexW2079660696

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.