Evidence map›Paper›PMID 23583556›Full record

ArticleCurrent biology : CB2013

Variation in the dorsal gradient distribution is a source for modified scaling of germ layers in Drosophila.

Juan Sebastian Chahda, Rui Sousa-Neves, Claudia Mieko Mizutani

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. The nested embryonic dorsal domains of BMP-target genes are not scaled to size during the evolution of Drosophila species.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2023
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Mechanisms of scaling in pattern formation.Development (Cambridge, England) · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Juan Sebastian ChahdaDepartment of Biology, Case Western Reserve University, Cleveland, OH 44106, USA.
Rui Sousa-Neves
Claudia Mieko Mizutani
Case Western Reserve University · US

Funding

MOLECULAR GENETICS OF NEUROGENESISR01NS029870 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BIER, ETHAN · 1992 to 2010
$3.5M
Real-time visualization of neural stem cell transcriptomeR21EB016535 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI GUO, WEIHONG, MIZUTANI, CLAUDIA · 2012 to 2013
$426k
NIBIB NIH HHS 1R21EB016535-01NIBIB NIH HHS R21 EB016535NINDS NIH HHS R01 NS029870NINDS NIH HHS R01NS29870
6 · The paper itself

Abstract

Specification of germ layers along the dorsoventral axis by morphogenetic gradients is an ideal model to study scaling properties of gradients and cell fate changes during evolution. Classical anatomical studies in divergent insects (e.g., flies and grasshoppers) revealed that the neuroectodermal size is conserved and originates similar numbers of neuroblasts of homologous identity. In contrast, mesodermal domains vary significantly in closely related Drosophila species. To further investigate the underlying mechanisms of scaling of germ layers across Drosophila species, we quantified the Dorsal (Dl)/NF-κB gradient, the main morphogenetic gradient that initiates separation of the mesoderm, neuroectoderm, and ectoderm. We discovered a variable range of Toll activation across species and found that Dl activates mesodermal genes at the same threshold levels in melanogaster sibling species. We also show that the Dl gradient distribution can be modulated by nuclear size and packing densities. We propose that variation in mesodermal size occurs at a fast evolutionary rate and is an important mechanism to define the ventral boundary of the neuroectoderm.

Indexed as

AnimalsCell NucleusDNA-Binding ProteinsDrosophilaDrosophila melanogasterDrosophila ProteinsGerm LayersMorphogenesisNF-kappa BOvumSpecies SpecificityD1 protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsNF-kappa B

Identifiers

PMID23583556
PMCPMC3731453
OpenAlexW2069374785

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.