Evidence map›Paper›PMID 23582330›Full record

ArticleCell2013

Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis.

Kai Papenfort, Yan Sun, Masatoshi Miyakoshi, Carin K Vanderpool, Jörg Vogel

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 129 papers.

0numbers the graph read from it
0cells of the map it votes in
129citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

129 citing papers in PubMed, 220 citations in OpenAlex.

  1. Bacterial small regulatory RNAs.Nature reviews. Microbiology · 2026
    Review
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  6. Origin and adaptive evolutionary trajectory of the 3' UTR-derived sRNA UhpU in Enterobacteriaceae.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  10. Review
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  13. Identification of YigL as a PLP/PNP phosphatase inApplied and environmental microbiology · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

69 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Kai PapenfortInstitute for Molecular Infection Biology, University of Würzburg, Würzburg 97070, Germany.
Yan Sun
Masatoshi Miyakoshi
Carin K Vanderpool
Jörg Vogel
University of Würzburg · DEUniversity of Illinois Urbana-Champaign · US

Funding

Molecular Determinants of Regulatory Hierarchy for Bacterial Small RNAsR01GM092830 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI VANDERPOOL, CARIN K · 2010 to 2020
$2.8M
NIGMS NIH HHS R01 GM092830
6 · The paper itself

Abstract

Glucose homeostasis is strictly controlled in all domains of life. Bacteria that are unable to balance intracellular sugar levels and deal with potentially toxic phosphosugars cease growth and risk being outcompeted. Here, we identify the conserved haloacid dehalogenase (HAD)-like enzyme YigL as the previously hypothesized phosphatase for detoxification of phosphosugars and reveal that its synthesis is activated by an Hfq-dependent small RNA in Salmonella typhimurium. We show that the glucose-6-P-responsive small RNA SgrS activates YigL synthesis in a translation-independent fashion by the selective stabilization of a decay intermediate of the dicistronic pldB-yigL messenger RNA (mRNA). Intriguingly, the major endoribonuclease RNase E, previously known to function together with small RNAs to degrade mRNA targets, is also essential for this process of mRNA activation. The exploitation of and targeted interference with regular RNA turnover described here may constitute a general route for small RNAs to rapidly activate both coding and noncoding genes.

Indexed as

Base SequenceEscherichia coliEscherichia coli ProteinsGlucoseHydrolasesMolecular Sequence DataMonosaccharide Transport ProteinsOperonPhosphoric Monoester HydrolasesRNA, BacterialRNA, MessengerRNA, Small UntranslatedRNA StabilitySalmonella typhimurium2-haloacid dehalogenaseEscherichia coli ProteinsGlucoseHydrolasesMonosaccharide Transport ProteinsPhosphoric Monoester HydrolasesRNA, BacterialRNA, MessengerRNA, Small UntranslatedSgrT protein, E coliYigL protein, E coli

Identifiers

PMID23582330
PMCPMC4151517
OpenAlexW1986459391

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.