Evidence map›Paper›PMID 23579791›Full record

ArticleMemorias do Instituto Oswaldo Cruz2013

JC polyomavirus infection in candidates for kidney transplantation living in the Brazilian Amazon region.

Fernando Assis Ferreira Melo, Ana Caroline Fonseca Bezerra, Bárbara Brasil Santana, Marluísa Oliveira Guimarães Ishak, Ricardo Ishak, Izaura Maria Vieira Cayres-Vallinoto, Antonio Carlos Rosário Vallinoto

Open access · diamondAbstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. BK Viremia among Iranian Renal Transplant Candidates.Iranian journal of pathology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Fernando Assis Ferreira MeloHospital das Clínicas do Acre, Rio Branco, AC, Brasil.
Ana Caroline Fonseca Bezerra
Bárbara Brasil Santana
Marluísa Oliveira Guimarães Ishak
Ricardo Ishak
Izaura Maria Vieira Cayres-Vallinoto
Antonio Carlos Rosário Vallinoto
Universidade Federal do Pará · BRUniversidade Federal do Acre · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study evaluated the relative occurrences of BK virus (BKV) and JC virus (JCV) infections in patients with chronic kidney disease (CKD). Urine samples were analysed from CKD patients and from 99 patients without CKD as a control. A total of 100 urine samples were analysed from the experimental (CKD patients) group and 99 from the control group. Following DNA extraction, polymerase chain reaction (PCR) was used to amplify a 173 bp region of the gene encoding the T antigen of the BKV and JCV. JCV and BKV infections were differentiated based on the enzymatic digestion of the amplified products using BamHI endonuclease. The results indicated that none of the patients in either group was infected with the BKV, whereas 11.1% (11/99) of the control group subjects and 4% (4/100) of the kidney patients were infected with the JCV. High levels of urea in the excreted urine, low urinary cellularity, reduced bladder washout and a delay in analysing the samples may have contributed to the low prevalence of infection. The results indicate that there is a need to increase the sensitivity of assays used to detect viruses in patients with CDK, especially given that polyomavirus infections, especially BKV, can lead to a loss of kidney function following transplantation.

Indexed as

AdultAgedBK VirusCase-Control StudiesDNA, ViralFemaleHumansJC VirusKidney Failure, ChronicKidney TransplantationMaleMiddle AgedPolymerase Chain ReactionPolyomavirus InfectionsTumor Virus InfectionsYoung AdultDNA, Viral

Identifiers

PMID23579791
PMCPMC3970657
OpenAlexW2133815677

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.