Evidence map›Paper›PMID 23579778›Full record

ArticleNature protocols2013

Isolation of DNA, RNA and protein from the starlet sea anemone Nematostella vectensis.

Derek J Stefanik, Francis S Wolenski, Lauren E Friedman, Thomas D Gilmore, John R Finnerty

Abstract read
PubMed Publisher
In one paragraph

Article in Nature protocols, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 41 citations in OpenAlex.

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  8. Altered Immune Landscape and Disrupted Coral-Frontiers in physiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Derek J StefanikDepartment of Biology, Boston University, Boston, Massachusetts, USA.
Francis S Wolenski
Lauren E Friedman
Thomas D Gilmore
John R Finnerty
Boston University · US

Funding

A functional systems biology approach to investigating the role of Wnt/beta-catenF31GM095289 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI STEFANIK, DEREK JOHN · 2011 to 2013
$88k
NIGMS NIH HHS F31 GM095289NIGMS NIH HHS F31 GM095289-01PHS HHS 5 P42 E507381
6 · The paper itself

Abstract

Among marine invertebrates, the starlet sea anemone Nematostella vectensis has emerged as an important laboratory model system. One advantage of working with this species relative to many other marine invertebrates is the ease of isolating relatively pure DNA, RNA and protein. Nematostella can be raised at high densities, under clean culture conditions, and it lacks integumentary or skeletal structures that can impede the recovery of DNA, RNA or protein. Here we describe methods used in our lab to isolate DNA, RNA and protein from Nematostella embryos, larvae and adults. The methods described here are less expensive than commercial kits and are more easily scalable to larger tissue amounts. Preparation of DNA can be completed in ∼7 h, RNA preparation in ∼1.5 h and protein preparation in ∼1 h.

Indexed as

AnimalsDNAGenetic TechniquesLarvaProteinsRNASea AnemonesDNAProteinsRNA

Identifiers

PMID23579778
OpenAlexW1994475110

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.