Evidence map›Paper›PMID 23577232›Full record

ArticleeLife2013

Stepwise assembly of the human replicative polymerase holoenzyme.

Mark Hedglin, Senthil K Perumal, Zhenxin Hu, Stephen Benkovic

Open access · goldAbstract read
In one paragraph

Article in eLife, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Structure of the human CTF18-RFC clamp loader bound to PCNA.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Replication of [AT/TA]Biochemistry · 2024
    Article
  9. Article
  10. Article
  11. Replication of [AT/TA]bioRxiv : the preprint server for biology · 2023
    Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Review
  17. Structure of the human clamp loader reveals an autoinhibited conformation of a substrate-bound AAA+ switch.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mark HedglinDepartment of Chemistry , The Pennsylvania State University , University Park , United States.
Senthil K Perumal
Zhenxin Hu
Stephen Benkovic
Pennsylvania State University · US

Funding

PHOSPHATE ACTIVATION MECHANISMSR01GM013306 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI BENKOVIC, STEPHEN J · 1985 to 2022
$10.0M
Polymerase Switching During Translesion DNA Synthesis within the Human SystemF32CA165471 · NCI · PENNSYLVANIA STATE UNIVERSITY, THE · PI HEDGLIN, MARK · 2012 to 2014
$156k
NCI NIH HHS F32 CA165471NIGMS NIH HHS R01 GM013306
6 · The paper itself

Abstract

In most organisms, clamp loaders catalyze both the loading of sliding clamps onto DNA and their removal. How these opposing activities are regulated during assembly of the DNA polymerase holoenzyme remains unknown. By utilizing FRET to monitor protein-DNA interactions, we examined assembly of the human holoenzyme. The results indicate that assembly proceeds in a stepwise manner. The clamp loader (RFC) loads a sliding clamp (PCNA) onto a primer/template junction but remains transiently bound to the DNA. Unable to slide away, PCNA re-engages with RFC and is unloaded. In the presence of polymerase (polδ), loaded PCNA is captured from DNA-bound RFC which subsequently dissociates, leaving behind the holoenzyme. These studies suggest that the unloading activity of RFC maximizes the utilization of PCNA by inhibiting the build-up of free PCNA on DNA in the absence of polymerase and recycling limited PCNA to keep up with ongoing replication. DOI:http://dx.doi.org/10.7554/eLife.00278.001.

Indexed as

DNA ReplicationAdenosine TriphosphateBinding SitesDNADNA Polymerase IIIFluorescence Resonance Energy TransferHoloenzymesHumansMicroscopy, FluorescenceModels, MolecularMutationProliferating Cell Nuclear AntigenProtein BindingProtein MultimerizationProtein Structure, QuaternaryAdenosine TriphosphateDNADNA Polymerase IIIHoloenzymesProliferating Cell Nuclear Antigenclamp loaderclamp loadingclamp unloadingDNA polymerase holoenzyme assemblyHumansliding clamp

Identifiers

PMID23577232
PMCPMC3614016
OpenAlexW2140690884

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.