ArticleFrontiers in plant science2013
Recent progress in the development of metabolome databases for plant systems biology.
Article in Frontiers in plant science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
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Who cites it
28 citing papers in PubMed.
- Data-Driven Characterization of Metabolome Reprogramming during Early Development of Sorghum Seedlings.Metabolites · 2024Article
- Nutritional, functional, and bioactive properties of african underutilized legumes.Frontiers in plant science · 2023Review
- Metabolomics as a Prospective Tool for Soybean (Current issues in molecular biology · 2022Review
- Metabolome Profiling: A Breeding Prediction Tool for Legume Performance under Biotic Stress Conditions.Plants (Basel, Switzerland) · 2022Review
- Development of RIKEN Plant Metabolome MetaDatabase.Plant & cell physiology · 2022Article
- Salinity Stress Alters the Secondary Metabolic Profile ofInternational journal of molecular sciences · 2021Article
- TOMATOMET: A metabolome database consists of 7118 accurate mass values detected in mature fruits of 25 tomato cultivars.Plant direct · 2021Article
- BioHackathon 2015: Semantics of data for life sciences and reproducible research.F1000Research · 2020Article
- Metabolomics Analysis of Mesenchymal Stem Cells.International journal of molecular and cellular medicine · 2019Review
- Systems biology of seeds: decoding the secret of biochemical seed factories for nutritional security.3 Biotech · 2018Review
- The Chemistry of Plant-Microbe Interactions in the Rhizosphere and the Potential for Metabolomics to Reveal Signaling Related to Defense Priming and Induced Systemic Resistance.Frontiers in plant science · 2018Review
- Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield.The Plant cell · 2017Article
- Metabolomics and Integrative Omics for the Development of Thai Traditional Medicine.Frontiers in pharmacology · 2017Review
- Understanding Plant Nitrogen Metabolism through Metabolomics and Computational Approaches.Plants (Basel, Switzerland) · 2016Review
- The WEIZMASS spectral library for high-confidence metabolite identification.Nature communications · 2016Article
- Metabolic Regulation of Carotenoid-Enriched Golden Rice Line.Frontiers in plant science · 2016Article
- Mild Potassium Chloride Stress Alters the Mineral Composition, Hormone Network, and Phenolic Profile in Artichoke Leaves.Frontiers in plant science · 2016Article
- Mathematical Modeling and Dynamic Simulation of Metabolic Reaction Systems Using Metabolome Time Series Data.Frontiers in molecular biosciences · 2016Review
- NMR spectroscopic search module for Spektraris, an online resource for plant natural product identification--Taxane diterpenoids from Taxus × media cell suspension cultures as a case study.Phytochemistry · 2015Article
- Crop improvement using life cycle datasets acquired under field conditions.Frontiers in plant science · 2015Review
Corrections and comments
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Metabolomics has grown greatly as a functional genomics tool, and has become an invaluable diagnostic tool for biochemical phenotyping of biological systems. Over the past decades, a number of databases involving information related to mass spectra, compound names and structures, statistical/mathematical models and metabolic pathways, and metabolite profile data have been developed. Such databases complement each other and support efficient growth in this area, although the data resources remain scattered across the World Wide Web. Here, we review available metabolome databases and summarize the present status of development of related tools, particularly focusing on the plant metabolome. Data sharing discussed here will pave way for the robust interpretation of metabolomic data and advances in plant systems biology.
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