Evidence map›Paper›PMID 23575227›Full record

SynthesisHuman molecular genetics2013

The chromosome 3q25 genomic region is associated with measures of adiposity in newborns in a multi-ethnic genome-wide association study.

Margrit Urbanek, M Geoffrey Hayes, Loren L Armstrong, Jean Morrison, Lynn P Lowe, Sylvia E Badon, Doug Scheftner, Anna Pluzhnikov, David Levine, Cathy C Laurie and 12 more

Abstract readMeta-AnalysisMulticenter Study
In one paragraph

Synthesis in Human molecular genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Trial
  6. Article
  7. Article
  8. Article
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  11. Article
  12. Genomics of body fat distribution.Journal of genetics · 2021
    Review
  13. Body Composition Measurements from Birth through 5 Years: Challenges, Gaps, and Existing & Emerging Technologies-A National Institutes of Health workshop.Obesity reviews : an official journal of the International Association for the Study of Obesity · 2020
    Review
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Margrit UrbanekDivision on Endocrinology, Metabolism and Molecular Medicine, Department of Medicine, University of Chicago, Chicago, IL 60637, USA. m-urbanek@northwestern.edu
M Geoffrey Hayes
Loren L Armstrong
Jean Morrison
Lynn P Lowe
Sylvia E Badon
Doug Scheftner
Anna Pluzhnikov
David Levine
Cathy C Laurie
Caitlin McHugh
Christine M Ackerman
Daniel B Mirel
Kimberly F Doheny
Cong Guo
Denise M Scholtens
Alan R Dyer
Boyd E Metzger
Timothy E Reddy
Nancy J Cox
William L Lowe
HAPO Study Cooperative Research Group

Funding

JH/CIDR Genotyping for Genome-Wide Association StudiesU01HG004438 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2007 to 2011
$24.2M
A Center for GEI Association StudiesU01HG004424 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY · 2007 to 2010
$21.4M
Hyperglycemia and Adverse Pregnancy Outcome (HAPO)R01HD034243 · NICHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI METZGER, BOYD E · 1999 to 2010
$16.2M
Genome Wide Association Coordinating CenterU01HG004446 · NHGRI · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2007 to 2011
$6.6M
HAPO: DATA COORDINATING CENTERR01HD034242 · NICHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DYER, ALAN R · 1999 to 2007
$3.0M
Genetics and Evolution of Fetal Human Fat Accretion During DevelopmentR01DK099820 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LOWE, WILLIAM L · 2013 to 2017
$2.0M
Diabetes Genes: Maternal Glycemia and Birth WeightR01DK067459 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LOWE, WILLIAM L · 2006 to 2008
$1.4M
GWA Mapping: Maternal Metabolism-Birth Weight InteractionsU01HG004415 · NHGRI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LOWE, WILLIAM L · 2007 to 2009
$1.1M
Replication of GWAS for Maternal Glycemia, Birthweight and their InteractionR01CA141688 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LOWE, WILLIAM L · 2009 to 2009
$399k
NCI NIH HHS CA141688NCI NIH HHS R01 CA141688NHGRI NIH HHS HG004415NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS U01 HG004415NHGRI NIH HHS U01 HG004424NHGRI NIH HHS U01 HG004438NHGRI NIH HHS U01HG004438NHGRI NIH HHS U01 HG004446NHGRI NIH HHS U01HG004446NHGRI NIH HHS U01HG04424NICHD NIH HHS HD34242NICHD NIH HHS HD34243NICHD NIH HHS R01 HD034242NICHD NIH HHS R01 HD034243NIDDK NIH HHS R01 DK067459NIDDK NIH HHS R01 DK099820
6 · The paper itself

Abstract

Newborns characterized as large and small for gestational age are at risk for increased mortality and morbidity during the first year of life as well as for obesity and dysglycemia as children and adults. The intrauterine environment and fetal genes contribute to the fetal size at birth. To define the genetic architecture underlying the newborn size, we performed a genome-wide association study (GWAS) in 4281 newborns in four ethnic groups from the Hyperglycemia and Adverse Pregnancy Outcome Study. We tested for association with newborn anthropometric traits (birth length, head circumference, birth weight, percent fat mass and sum of skinfolds) and newborn metabolic traits (cord glucose and C-peptide) under three models. Model 1 adjusted for field center, ancestry, neonatal gender, gestational age at delivery, parity, maternal age at oral glucose tolerance test (OGTT); Model 2 adjusted for Model 1 covariates, maternal body mass index (BMI) at OGTT, maternal height at OGTT, maternal mean arterial pressure at OGTT, maternal smoking and drinking; Model 3 adjusted for Model 2 covariates, maternal glucose and C-peptide at OGTT. Strong evidence for association was observed with measures of newborn adiposity (sum of skinfolds model 3 Z-score 7.356, P = 1.90×10⁻¹³, and to a lesser degree fat mass and birth weight) and a region on Chr3q25.31 mapping between CCNL and LEKR1. These findings were replicated in an independent cohort of 2296 newborns. This region has previously been shown to be associated with birth weight in Europeans. The current study suggests that association of this locus with birth weight is secondary to an effect on fat as opposed to lean body mass.

Indexed as

AdiposityAsian PeopleBirth WeightBlack PeopleBody Mass IndexCaribbean RegionChromosomes, Human, Pair 3Cohort StudiesCyclinsEthnicityFemaleGenome-Wide Association StudyHumansInfant, NewbornLinear ModelsMaleCCNL1 protein, humanCyclinsProteinase Inhibitory Proteins, SecretorySerine Peptidase Inhibitor Kazal-Type 5SPINK5 protein, human

Identifiers

PMID23575227
PMCPMC3736865

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.